Gene : AT3G60060 A. thaliana TAIR10
Defline:  (1 of 3) 1.2.1.42//1.2.1.50 - Hexadecanal dehydrogenase (acylating) / Fatty acyl-CoA reductase // Long-chain-fatty-acyl-CoA reductase / Acyl-CoA reductase Genomic Order:  5062
Name:  ? AT3G60060 Secondary Identifier:  ? PAC:19659566
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G60060 0.5kb upstream 0.5kb upstream 1288 true Chr3: 22181791-22183078 Arabidopsis thaliana
AT3G60060 0.5kb upstream 0.5kb upstream 500 false Chr3: 22181791-22182290 Arabidopsis thaliana
AT3G60060 0.5kb downstream 0.5kb downstream 1288 true Chr3: 22182291-22183578 Arabidopsis thaliana
AT3G60060 0.5kb downstream 0.5kb downstream 500 false Chr3: 22183079-22183578 Arabidopsis thaliana
AT3G60060 1.0kb upstream 1.0kb upstream 1788 true Chr3: 22181291-22183078 Arabidopsis thaliana
AT3G60060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22181291-22182290 Arabidopsis thaliana
AT3G60060 1.0kb downstream 1.0kb downstream 1788 true Chr3: 22182291-22184078 Arabidopsis thaliana
AT3G60060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22183079-22184078 Arabidopsis thaliana
AT3G60060 2.0kb upstream 2.0kb upstream 2788 true Chr3: 22180291-22183078 Arabidopsis thaliana
AT3G60060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22180291-22182290 Arabidopsis thaliana
AT3G60060 2.0kb downstream 2.0kb downstream 2788 true Chr3: 22182291-22185078 Arabidopsis thaliana
AT3G60060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22183079-22185078 Arabidopsis thaliana
AT3G60060 5.0kb upstream 5.0kb upstream 5788 true Chr3: 22177291-22183078 Arabidopsis thaliana
AT3G60060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22177291-22182290 Arabidopsis thaliana
AT3G60060 5.0kb downstream 5.0kb downstream 5788 true Chr3: 22182291-22188078 Arabidopsis thaliana
AT3G60060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22183079-22188078 Arabidopsis thaliana
AT3G60060 10.0kb upstream 10.0kb upstream 10788 true Chr3: 22172291-22183078 Arabidopsis thaliana
AT3G60060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22172291-22182290 Arabidopsis thaliana
AT3G60060 10.0kb downstream 10.0kb downstream 10788 true Chr3: 22182291-22193078 Arabidopsis thaliana
AT3G60060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22183079-22193078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494186 5273 Angiosperm Singleton cluster - no MSA
122329775 5261 Brassicaceae Singleton cluster - no MSA
123771060 5264 Brassicales-Malvales Singleton cluster - no MSA
124269594 5266 SBM Singleton cluster - no MSA
124125725 5268 Malvidae Singleton cluster - no MSA
123854681 5270 Rosid Singleton cluster - no MSA
123440691 5271 Pentapetalae Singleton cluster - no MSA
122476276 5272 Eudicot Singleton cluster - no MSA
120767555 5274 Embryophyte Singleton cluster - no MSA
122809951 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.057     Low  
cufflinks 0.057     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.138     Low High
cufflinks 0.014     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain