Gene : AT3G56540 A. thaliana TAIR10
Defline:  (1 of 6) PTHR11802:SF66 - SERINE CARBOXYPEPTIDASE-LIKE 36-RELATED Genomic Order:  4705
Name:  ? AT3G56540 Secondary Identifier:  ? PAC:19662340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G56540 0.5kb upstream 0.5kb upstream 1570 true Chr3: 20950323-20951892 Arabidopsis thaliana
AT3G56540 0.5kb upstream 0.5kb upstream 500 false Chr3: 20950323-20950822 Arabidopsis thaliana
AT3G56540 0.5kb downstream 0.5kb downstream 1570 true Chr3: 20950823-20952392 Arabidopsis thaliana
AT3G56540 0.5kb downstream 0.5kb downstream 500 false Chr3: 20951893-20952392 Arabidopsis thaliana
AT3G56540 1.0kb upstream 1.0kb upstream 2070 true Chr3: 20949823-20951892 Arabidopsis thaliana
AT3G56540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 20949823-20950822 Arabidopsis thaliana
AT3G56540 1.0kb downstream 1.0kb downstream 2070 true Chr3: 20950823-20952892 Arabidopsis thaliana
AT3G56540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 20951893-20952892 Arabidopsis thaliana
AT3G56540 2.0kb upstream 2.0kb upstream 3070 true Chr3: 20948823-20951892 Arabidopsis thaliana
AT3G56540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 20948823-20950822 Arabidopsis thaliana
AT3G56540 2.0kb downstream 2.0kb downstream 3070 true Chr3: 20950823-20953892 Arabidopsis thaliana
AT3G56540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 20951893-20953892 Arabidopsis thaliana
AT3G56540 5.0kb upstream 5.0kb upstream 6070 true Chr3: 20945823-20951892 Arabidopsis thaliana
AT3G56540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 20945823-20950822 Arabidopsis thaliana
AT3G56540 5.0kb downstream 5.0kb downstream 6070 true Chr3: 20950823-20956892 Arabidopsis thaliana
AT3G56540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 20951893-20956892 Arabidopsis thaliana
AT3G56540 10.0kb upstream 10.0kb upstream 11070 true Chr3: 20940823-20951892 Arabidopsis thaliana
AT3G56540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 20940823-20950822 Arabidopsis thaliana
AT3G56540 10.0kb downstream 10.0kb downstream 11070 true Chr3: 20950823-20961892 Arabidopsis thaliana
AT3G56540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 20951893-20961892 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330051 5261 Brassicaceae Singleton cluster - no MSA
123771324 5264 Brassicales-Malvales Singleton cluster - no MSA
124269855 5266 SBM Singleton cluster - no MSA
124125970 5268 Malvidae Singleton cluster - no MSA
124064162 5270 Rosid View MSA
123752631 5271 Pentapetalae View MSA
122797203 5272 Eudicot View MSA
122050629 5273 Angiosperm View MSA
121312037 5274 Embryophyte View MSA
123349249 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.014     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain