Gene : MED6 A. thaliana TAIR10
Primary Identifier:  ? AT3G21350 Defline:  (1 of 1) K15128 - mediator of RNA polymerase II transcription subunit 6 (MED6)
Genomic Order:  2224 Name:  ? AT3G21350
Secondary Identifier:  ? PAC:19660649
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G21350 0.5kb upstream 0.5kb upstream 2175 true Chr3: 7516570-7518744 Arabidopsis thaliana
AT3G21350 0.5kb upstream 0.5kb upstream 500 false Chr3: 7516570-7517069 Arabidopsis thaliana
AT3G21350 0.5kb downstream 0.5kb downstream 2175 true Chr3: 7517070-7519244 Arabidopsis thaliana
AT3G21350 0.5kb downstream 0.5kb downstream 500 false Chr3: 7518745-7519244 Arabidopsis thaliana
AT3G21350 1.0kb upstream 1.0kb upstream 2675 true Chr3: 7516070-7518744 Arabidopsis thaliana
AT3G21350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7516070-7517069 Arabidopsis thaliana
AT3G21350 1.0kb downstream 1.0kb downstream 2675 true Chr3: 7517070-7519744 Arabidopsis thaliana
AT3G21350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7518745-7519744 Arabidopsis thaliana
AT3G21350 2.0kb upstream 2.0kb upstream 3675 true Chr3: 7515070-7518744 Arabidopsis thaliana
AT3G21350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7515070-7517069 Arabidopsis thaliana
AT3G21350 2.0kb downstream 2.0kb downstream 3675 true Chr3: 7517070-7520744 Arabidopsis thaliana
AT3G21350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7518745-7520744 Arabidopsis thaliana
AT3G21350 5.0kb upstream 5.0kb upstream 6675 true Chr3: 7512070-7518744 Arabidopsis thaliana
AT3G21350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7512070-7517069 Arabidopsis thaliana
AT3G21350 5.0kb downstream 5.0kb downstream 6675 true Chr3: 7517070-7523744 Arabidopsis thaliana
AT3G21350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7518745-7523744 Arabidopsis thaliana
AT3G21350 10.0kb upstream 10.0kb upstream 11675 true Chr3: 7507070-7518744 Arabidopsis thaliana
AT3G21350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7507070-7517069 Arabidopsis thaliana
AT3G21350 10.0kb downstream 10.0kb downstream 11675 true Chr3: 7517070-7528744 Arabidopsis thaliana
AT3G21350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7518745-7528744 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373150 5261 Brassicaceae View MSA
123833172 5264 Brassicales-Malvales View MSA
124345277 5266 SBM View MSA
124241920 5268 Malvidae View MSA
124065593 5270 Rosid View MSA
123740699 5271 Pentapetalae View MSA
122793501 5272 Eudicot View MSA
122048865 5273 Angiosperm View MSA
121348373 5274 Embryophyte View MSA
123425020 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.428        
cufflinks 7.222        
cufflinks 4.277       Low
cufflinks 7.022        
cufflinks 4.705        
cufflinks 6.9        

0 Strain