Gene : AT3G21620 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13018:SF46 - ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  2254
Name:  ? AT3G21620 Secondary Identifier:  ? PAC:19658874
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G21620 0.5kb upstream 0.5kb upstream 4004 true Chr3: 7610958-7614961 Arabidopsis thaliana
AT3G21620 0.5kb upstream 0.5kb upstream 500 false Chr3: 7614462-7614961 Arabidopsis thaliana
AT3G21620 0.5kb downstream 0.5kb downstream 4004 true Chr3: 7610458-7614461 Arabidopsis thaliana
AT3G21620 0.5kb downstream 0.5kb downstream 500 false Chr3: 7610458-7610957 Arabidopsis thaliana
AT3G21620 1.0kb upstream 1.0kb upstream 4504 true Chr3: 7610958-7615461 Arabidopsis thaliana
AT3G21620 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7614462-7615461 Arabidopsis thaliana
AT3G21620 1.0kb downstream 1.0kb downstream 4504 true Chr3: 7609958-7614461 Arabidopsis thaliana
AT3G21620 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7609958-7610957 Arabidopsis thaliana
AT3G21620 2.0kb upstream 2.0kb upstream 5504 true Chr3: 7610958-7616461 Arabidopsis thaliana
AT3G21620 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7614462-7616461 Arabidopsis thaliana
AT3G21620 2.0kb downstream 2.0kb downstream 5504 true Chr3: 7608958-7614461 Arabidopsis thaliana
AT3G21620 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7608958-7610957 Arabidopsis thaliana
AT3G21620 5.0kb upstream 5.0kb upstream 8504 true Chr3: 7610958-7619461 Arabidopsis thaliana
AT3G21620 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7614462-7619461 Arabidopsis thaliana
AT3G21620 5.0kb downstream 5.0kb downstream 8504 true Chr3: 7605958-7614461 Arabidopsis thaliana
AT3G21620 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7605958-7610957 Arabidopsis thaliana
AT3G21620 10.0kb upstream 10.0kb upstream 13504 true Chr3: 7610958-7624461 Arabidopsis thaliana
AT3G21620 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7614462-7624461 Arabidopsis thaliana
AT3G21620 10.0kb downstream 10.0kb downstream 13504 true Chr3: 7600958-7614461 Arabidopsis thaliana
AT3G21620 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7600958-7610957 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372882 5261 Brassicaceae View MSA
123833089 5264 Brassicales-Malvales View MSA
124338468 5266 SBM View MSA
124253508 5268 Malvidae View MSA
124067604 5270 Rosid View MSA
123747702 5271 Pentapetalae View MSA
122790642 5272 Eudicot View MSA
122047982 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.137     Low  
cufflinks 0.22     Low  
cufflinks 0.068     Low Low
cufflinks 0.532       High
cufflinks 0.089     Low  
cufflinks 0.372        

0 Strain