Gene : AT3G13350 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13711//PTHR13711:SF202 - SWI/SNF-RELATED CHROMATIN BINDING PROTEIN // HIGH MOBILITY GROUP B PROTEIN 10-RELATED Genomic Order:  1330
Name:  ? AT3G13350 Secondary Identifier:  ? PAC:19662203
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13350 0.5kb upstream 0.5kb upstream 3012 true Chr3: 4335475-4338486 Arabidopsis thaliana
AT3G13350 0.5kb upstream 0.5kb upstream 500 false Chr3: 4337987-4338486 Arabidopsis thaliana
AT3G13350 0.5kb downstream 0.5kb downstream 3012 true Chr3: 4334975-4337986 Arabidopsis thaliana
AT3G13350 0.5kb downstream 0.5kb downstream 500 false Chr3: 4334975-4335474 Arabidopsis thaliana
AT3G13350 1.0kb upstream 1.0kb upstream 3512 true Chr3: 4335475-4338986 Arabidopsis thaliana
AT3G13350 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4337987-4338986 Arabidopsis thaliana
AT3G13350 1.0kb downstream 1.0kb downstream 3512 true Chr3: 4334475-4337986 Arabidopsis thaliana
AT3G13350 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4334475-4335474 Arabidopsis thaliana
AT3G13350 2.0kb upstream 2.0kb upstream 4512 true Chr3: 4335475-4339986 Arabidopsis thaliana
AT3G13350 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4337987-4339986 Arabidopsis thaliana
AT3G13350 2.0kb downstream 2.0kb downstream 4512 true Chr3: 4333475-4337986 Arabidopsis thaliana
AT3G13350 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4333475-4335474 Arabidopsis thaliana
AT3G13350 5.0kb upstream 5.0kb upstream 7512 true Chr3: 4335475-4342986 Arabidopsis thaliana
AT3G13350 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4337987-4342986 Arabidopsis thaliana
AT3G13350 5.0kb downstream 5.0kb downstream 7512 true Chr3: 4330475-4337986 Arabidopsis thaliana
AT3G13350 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4330475-4335474 Arabidopsis thaliana
AT3G13350 10.0kb upstream 10.0kb upstream 12512 true Chr3: 4335475-4347986 Arabidopsis thaliana
AT3G13350 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4337987-4347986 Arabidopsis thaliana
AT3G13350 10.0kb downstream 10.0kb downstream 12512 true Chr3: 4325475-4337986 Arabidopsis thaliana
AT3G13350 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4325475-4335474 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375287 5261 Brassicaceae View MSA
123831186 5264 Brassicales-Malvales View MSA
124340597 5266 SBM View MSA
124240999 5268 Malvidae View MSA
124066815 5270 Rosid View MSA
123749147 5271 Pentapetalae View MSA
122792446 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.71        
cufflinks 7.321        
cufflinks 7.226        
cufflinks 8.55       High
cufflinks 8.0        
cufflinks 6.676       Low

0 Strain