Gene : AT3G13560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR32227//PTHR32227:SF48 - FAMILY NOT NAMED // GLUCAN ENDO-1,3-BETA-GLUCOSIDASE 4 Genomic Order:  1358
Name:  ? AT3G13560 Secondary Identifier:  ? PAC:19661904
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13560 0.5kb upstream 0.5kb upstream 3453 true Chr3: 4425227-4428679 Arabidopsis thaliana
AT3G13560 0.5kb upstream 0.5kb upstream 500 false Chr3: 4428180-4428679 Arabidopsis thaliana
AT3G13560 0.5kb downstream 0.5kb downstream 3453 true Chr3: 4424727-4428179 Arabidopsis thaliana
AT3G13560 0.5kb downstream 0.5kb downstream 500 false Chr3: 4424727-4425226 Arabidopsis thaliana
AT3G13560 1.0kb upstream 1.0kb upstream 3953 true Chr3: 4425227-4429179 Arabidopsis thaliana
AT3G13560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4428180-4429179 Arabidopsis thaliana
AT3G13560 1.0kb downstream 1.0kb downstream 3953 true Chr3: 4424227-4428179 Arabidopsis thaliana
AT3G13560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4424227-4425226 Arabidopsis thaliana
AT3G13560 2.0kb upstream 2.0kb upstream 4953 true Chr3: 4425227-4430179 Arabidopsis thaliana
AT3G13560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4428180-4430179 Arabidopsis thaliana
AT3G13560 2.0kb downstream 2.0kb downstream 4953 true Chr3: 4423227-4428179 Arabidopsis thaliana
AT3G13560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4423227-4425226 Arabidopsis thaliana
AT3G13560 5.0kb upstream 5.0kb upstream 7953 true Chr3: 4425227-4433179 Arabidopsis thaliana
AT3G13560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4428180-4433179 Arabidopsis thaliana
AT3G13560 5.0kb downstream 5.0kb downstream 7953 true Chr3: 4420227-4428179 Arabidopsis thaliana
AT3G13560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4420227-4425226 Arabidopsis thaliana
AT3G13560 10.0kb upstream 10.0kb upstream 12953 true Chr3: 4425227-4438179 Arabidopsis thaliana
AT3G13560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4428180-4438179 Arabidopsis thaliana
AT3G13560 10.0kb downstream 10.0kb downstream 12953 true Chr3: 4415227-4428179 Arabidopsis thaliana
AT3G13560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4415227-4425226 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367639 5261 Brassicaceae View MSA
123831971 5264 Brassicales-Malvales View MSA
124342840 5266 SBM View MSA
124238248 5268 Malvidae View MSA
124066153 5270 Rosid View MSA
123741753 5271 Pentapetalae View MSA
122795743 5272 Eudicot View MSA
122043027 5273 Angiosperm View MSA
121351661 5274 Embryophyte View MSA
123382266 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.542       High
cufflinks 3.907        
cufflinks 2.129        
cufflinks 3.344        
cufflinks 1.776       Low
cufflinks 5.487        

0 Strain