Gene : AT3G14420 A. thaliana TAIR10
Defline:  (1 of 5) K11517 - (S)-2-hydroxy-acid oxidase (HAO) Genomic Order:  1466
Name:  ? AT3G14420 Secondary Identifier:  ? PAC:19663565
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14420 0.5kb upstream 0.5kb upstream 3156 true Chr3: 4821023-4824178 Arabidopsis thaliana
AT3G14420 0.5kb upstream 0.5kb upstream 500 false Chr3: 4821023-4821522 Arabidopsis thaliana
AT3G14420 0.5kb downstream 0.5kb downstream 3156 true Chr3: 4821523-4824678 Arabidopsis thaliana
AT3G14420 0.5kb downstream 0.5kb downstream 500 false Chr3: 4824179-4824678 Arabidopsis thaliana
AT3G14420 1.0kb upstream 1.0kb upstream 3656 true Chr3: 4820523-4824178 Arabidopsis thaliana
AT3G14420 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4820523-4821522 Arabidopsis thaliana
AT3G14420 1.0kb downstream 1.0kb downstream 3656 true Chr3: 4821523-4825178 Arabidopsis thaliana
AT3G14420 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4824179-4825178 Arabidopsis thaliana
AT3G14420 2.0kb upstream 2.0kb upstream 4656 true Chr3: 4819523-4824178 Arabidopsis thaliana
AT3G14420 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4819523-4821522 Arabidopsis thaliana
AT3G14420 2.0kb downstream 2.0kb downstream 4656 true Chr3: 4821523-4826178 Arabidopsis thaliana
AT3G14420 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4824179-4826178 Arabidopsis thaliana
AT3G14420 5.0kb upstream 5.0kb upstream 7656 true Chr3: 4816523-4824178 Arabidopsis thaliana
AT3G14420 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4816523-4821522 Arabidopsis thaliana
AT3G14420 5.0kb downstream 5.0kb downstream 7656 true Chr3: 4821523-4829178 Arabidopsis thaliana
AT3G14420 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4824179-4829178 Arabidopsis thaliana
AT3G14420 10.0kb upstream 10.0kb upstream 12656 true Chr3: 4811523-4824178 Arabidopsis thaliana
AT3G14420 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4811523-4821522 Arabidopsis thaliana
AT3G14420 10.0kb downstream 10.0kb downstream 12656 true Chr3: 4821523-4834178 Arabidopsis thaliana
AT3G14420 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4824179-4834178 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377536 5261 Brassicaceae View MSA
123834066 5264 Brassicales-Malvales View MSA
124343405 5266 SBM View MSA
124252128 5268 Malvidae View MSA
124071344 5270 Rosid View MSA
123746733 5271 Pentapetalae View MSA
122791103 5272 Eudicot View MSA
122046790 5273 Angiosperm View MSA
121345614 5274 Embryophyte View MSA
123426843 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 65.28     High  
cufflinks 0.036     Low Low
cufflinks 63.314     High  
cufflinks 0.104     Low  
cufflinks 58.198     High  
cufflinks 0.04     Low  

0 Strain