Gene : AT3G14780 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  1504
Name:  ? AT3G14780 Secondary Identifier:  ? PAC:19661083
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6773 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14780 0.5kb upstream 0.5kb upstream 2239 true Chr3: 4961806-4964044 Arabidopsis thaliana
AT3G14780 0.5kb upstream 0.5kb upstream 500 false Chr3: 4963545-4964044 Arabidopsis thaliana
AT3G14780 0.5kb downstream 0.5kb downstream 2239 true Chr3: 4961306-4963544 Arabidopsis thaliana
AT3G14780 0.5kb downstream 0.5kb downstream 500 false Chr3: 4961306-4961805 Arabidopsis thaliana
AT3G14780 1.0kb upstream 1.0kb upstream 2739 true Chr3: 4961806-4964544 Arabidopsis thaliana
AT3G14780 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4963545-4964544 Arabidopsis thaliana
AT3G14780 1.0kb downstream 1.0kb downstream 2739 true Chr3: 4960806-4963544 Arabidopsis thaliana
AT3G14780 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4960806-4961805 Arabidopsis thaliana
AT3G14780 2.0kb upstream 2.0kb upstream 3739 true Chr3: 4961806-4965544 Arabidopsis thaliana
AT3G14780 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4963545-4965544 Arabidopsis thaliana
AT3G14780 2.0kb downstream 2.0kb downstream 3739 true Chr3: 4959806-4963544 Arabidopsis thaliana
AT3G14780 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4959806-4961805 Arabidopsis thaliana
AT3G14780 5.0kb upstream 5.0kb upstream 6739 true Chr3: 4961806-4968544 Arabidopsis thaliana
AT3G14780 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4963545-4968544 Arabidopsis thaliana
AT3G14780 5.0kb downstream 5.0kb downstream 6739 true Chr3: 4956806-4963544 Arabidopsis thaliana
AT3G14780 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4956806-4961805 Arabidopsis thaliana
AT3G14780 10.0kb upstream 10.0kb upstream 11739 true Chr3: 4961806-4973544 Arabidopsis thaliana
AT3G14780 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4963545-4973544 Arabidopsis thaliana
AT3G14780 10.0kb downstream 10.0kb downstream 11739 true Chr3: 4951806-4963544 Arabidopsis thaliana
AT3G14780 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4951806-4961805 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338301 5261 Brassicaceae View MSA
123778893 5264 Brassicales-Malvales View MSA
124277229 5266 SBM View MSA
124249869 5268 Malvidae View MSA
123952435 5270 Rosid View MSA
123530225 5271 Pentapetalae View MSA
122565195 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.154     Low Low
cufflinks 6.376        
cufflinks 0.226     Low  
cufflinks 8.035       High
cufflinks 0.213     Low  
cufflinks 2.932        

0 Strain