Gene : MSL5 A. thaliana TAIR10
Primary Identifier:  ? AT3G14810 Defline:  (1 of 2) PTHR31618:SF7 - MECHANOSENSITIVE ION CHANNEL PROTEIN 4-RELATED
Genomic Order:  1506 Name:  ? AT3G14810
Secondary Identifier:  ? PAC:19660713
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14810 0.5kb upstream 0.5kb upstream 4045 true Chr3: 4970990-4975034 Arabidopsis thaliana
AT3G14810 0.5kb upstream 0.5kb upstream 500 false Chr3: 4974535-4975034 Arabidopsis thaliana
AT3G14810 0.5kb downstream 0.5kb downstream 4045 true Chr3: 4970490-4974534 Arabidopsis thaliana
AT3G14810 0.5kb downstream 0.5kb downstream 500 false Chr3: 4970490-4970989 Arabidopsis thaliana
AT3G14810 1.0kb upstream 1.0kb upstream 4545 true Chr3: 4970990-4975534 Arabidopsis thaliana
AT3G14810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4974535-4975534 Arabidopsis thaliana
AT3G14810 1.0kb downstream 1.0kb downstream 4545 true Chr3: 4969990-4974534 Arabidopsis thaliana
AT3G14810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4969990-4970989 Arabidopsis thaliana
AT3G14810 2.0kb upstream 2.0kb upstream 5545 true Chr3: 4970990-4976534 Arabidopsis thaliana
AT3G14810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4974535-4976534 Arabidopsis thaliana
AT3G14810 2.0kb downstream 2.0kb downstream 5545 true Chr3: 4968990-4974534 Arabidopsis thaliana
AT3G14810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4968990-4970989 Arabidopsis thaliana
AT3G14810 5.0kb upstream 5.0kb upstream 8545 true Chr3: 4970990-4979534 Arabidopsis thaliana
AT3G14810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4974535-4979534 Arabidopsis thaliana
AT3G14810 5.0kb downstream 5.0kb downstream 8545 true Chr3: 4965990-4974534 Arabidopsis thaliana
AT3G14810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4965990-4970989 Arabidopsis thaliana
AT3G14810 10.0kb upstream 10.0kb upstream 13545 true Chr3: 4970990-4984534 Arabidopsis thaliana
AT3G14810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4974535-4984534 Arabidopsis thaliana
AT3G14810 10.0kb downstream 10.0kb downstream 13545 true Chr3: 4960990-4974534 Arabidopsis thaliana
AT3G14810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4960990-4970989 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366524 5261 Brassicaceae View MSA
123799190 5264 Brassicales-Malvales View MSA
124296738 5266 SBM View MSA
124148806 5268 Malvidae View MSA
124068168 5270 Rosid View MSA
123745809 5271 Pentapetalae View MSA
122795005 5272 Eudicot View MSA
122045304 5273 Angiosperm View MSA
121348130 5274 Embryophyte View MSA
123428857 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18        
cufflinks 8.103        
cufflinks 2.893        
cufflinks 10.509        
cufflinks 2.971        
cufflinks 11.775       High

0 Strain