Gene : mMDH2 A. thaliana TAIR10
Primary Identifier:  ? AT3G15020 Defline:  (1 of 5) K00026 - malate dehydrogenase (MDH2)
Genomic Order:  1528 Name:  ? AT3G15020
Secondary Identifier:  ? PAC:19661585
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Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUCONEO-PWY Arabidopsis thaliana pathologic  
Athaliana GLYOXYLATE-BYPASS Arabidopsis thaliana pathologic  
Athaliana PWY-5464 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-5690 Arabidopsis thaliana pathologic  
Athaliana PWY66-399 Arabidopsis thaliana pathologic  
Athaliana PWY-7115 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15020 0.5kb upstream 0.5kb upstream 2681 true Chr3: 5055568-5058248 Arabidopsis thaliana
AT3G15020 0.5kb upstream 0.5kb upstream 500 false Chr3: 5055568-5056067 Arabidopsis thaliana
AT3G15020 0.5kb downstream 0.5kb downstream 2681 true Chr3: 5056068-5058748 Arabidopsis thaliana
AT3G15020 0.5kb downstream 0.5kb downstream 500 false Chr3: 5058249-5058748 Arabidopsis thaliana
AT3G15020 1.0kb upstream 1.0kb upstream 3181 true Chr3: 5055068-5058248 Arabidopsis thaliana
AT3G15020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5055068-5056067 Arabidopsis thaliana
AT3G15020 1.0kb downstream 1.0kb downstream 3181 true Chr3: 5056068-5059248 Arabidopsis thaliana
AT3G15020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5058249-5059248 Arabidopsis thaliana
AT3G15020 2.0kb upstream 2.0kb upstream 4181 true Chr3: 5054068-5058248 Arabidopsis thaliana
AT3G15020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5054068-5056067 Arabidopsis thaliana
AT3G15020 2.0kb downstream 2.0kb downstream 4181 true Chr3: 5056068-5060248 Arabidopsis thaliana
AT3G15020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5058249-5060248 Arabidopsis thaliana
AT3G15020 5.0kb upstream 5.0kb upstream 7181 true Chr3: 5051068-5058248 Arabidopsis thaliana
AT3G15020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5051068-5056067 Arabidopsis thaliana
AT3G15020 5.0kb downstream 5.0kb downstream 7181 true Chr3: 5056068-5063248 Arabidopsis thaliana
AT3G15020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5058249-5063248 Arabidopsis thaliana
AT3G15020 10.0kb upstream 10.0kb upstream 12181 true Chr3: 5046068-5058248 Arabidopsis thaliana
AT3G15020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5046068-5056067 Arabidopsis thaliana
AT3G15020 10.0kb downstream 10.0kb downstream 12181 true Chr3: 5056068-5068248 Arabidopsis thaliana
AT3G15020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5058249-5068248 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122331840 5261 Brassicaceae View MSA
123840380 5264 Brassicales-Malvales View MSA
124342947 5266 SBM View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.102        
cufflinks 7.999        
cufflinks 5.904        
cufflinks 9.344        
cufflinks 4.682       Low
cufflinks 13.718       High

0 Strain