Gene : AT3G16120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11886//PTHR11886:SF47 - DYNEIN LIGHT CHAIN // SUBFAMILY NOT NAMED Genomic Order:  1653
Name:  ? AT3G16120 Secondary Identifier:  ? PAC:19661995
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16120 0.5kb upstream 0.5kb upstream 1263 true Chr3: 5464269-5465531 Arabidopsis thaliana
AT3G16120 0.5kb upstream 0.5kb upstream 500 false Chr3: 5464269-5464768 Arabidopsis thaliana
AT3G16120 0.5kb downstream 0.5kb downstream 1263 true Chr3: 5464769-5466031 Arabidopsis thaliana
AT3G16120 0.5kb downstream 0.5kb downstream 500 false Chr3: 5465532-5466031 Arabidopsis thaliana
AT3G16120 1.0kb upstream 1.0kb upstream 1763 true Chr3: 5463769-5465531 Arabidopsis thaliana
AT3G16120 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5463769-5464768 Arabidopsis thaliana
AT3G16120 1.0kb downstream 1.0kb downstream 1763 true Chr3: 5464769-5466531 Arabidopsis thaliana
AT3G16120 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5465532-5466531 Arabidopsis thaliana
AT3G16120 2.0kb upstream 2.0kb upstream 2763 true Chr3: 5462769-5465531 Arabidopsis thaliana
AT3G16120 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5462769-5464768 Arabidopsis thaliana
AT3G16120 2.0kb downstream 2.0kb downstream 2763 true Chr3: 5464769-5467531 Arabidopsis thaliana
AT3G16120 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5465532-5467531 Arabidopsis thaliana
AT3G16120 5.0kb upstream 5.0kb upstream 5763 true Chr3: 5459769-5465531 Arabidopsis thaliana
AT3G16120 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5459769-5464768 Arabidopsis thaliana
AT3G16120 5.0kb downstream 5.0kb downstream 5763 true Chr3: 5464769-5470531 Arabidopsis thaliana
AT3G16120 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5465532-5470531 Arabidopsis thaliana
AT3G16120 10.0kb upstream 10.0kb upstream 10763 true Chr3: 5454769-5465531 Arabidopsis thaliana
AT3G16120 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5454769-5464768 Arabidopsis thaliana
AT3G16120 10.0kb downstream 10.0kb downstream 10763 true Chr3: 5464769-5475531 Arabidopsis thaliana
AT3G16120 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5465532-5475531 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365439 5261 Brassicaceae View MSA
123838895 5264 Brassicales-Malvales View MSA
124336615 5266 SBM View MSA
124249064 5268 Malvidae View MSA
124072980 5270 Rosid View MSA
123740805 5271 Pentapetalae View MSA
122787832 5272 Eudicot View MSA
122043951 5273 Angiosperm View MSA
121349084 5274 Embryophyte View MSA
123427557 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.277     Low  
cufflinks 0.02     Low Low
cufflinks 0.458       High
cufflinks 0.09     Low  
cufflinks 0.318        
cufflinks 0.083     Low  

0 Strain