Gene : VMA10 A. thaliana TAIR10
Primary Identifier:  ? AT3G01390 Defline:  (1 of 3) K02152 - V-type H+-transporting ATPase subunit G (ATPeV1G, ATP6G)
Genomic Order:  54 Name:  ? AT3G01390
Secondary Identifier:  ? PAC:19659028
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01390 0.5kb upstream 0.5kb upstream 2041 true Chr3: 149999-152039 Arabidopsis thaliana
AT3G01390 0.5kb upstream 0.5kb upstream 500 false Chr3: 151540-152039 Arabidopsis thaliana
AT3G01390 0.5kb downstream 0.5kb downstream 2041 true Chr3: 149499-151539 Arabidopsis thaliana
AT3G01390 0.5kb downstream 0.5kb downstream 500 false Chr3: 149499-149998 Arabidopsis thaliana
AT3G01390 1.0kb upstream 1.0kb upstream 2541 true Chr3: 149999-152539 Arabidopsis thaliana
AT3G01390 1.0kb upstream 1.0kb upstream 1000 false Chr3: 151540-152539 Arabidopsis thaliana
AT3G01390 1.0kb downstream 1.0kb downstream 2541 true Chr3: 148999-151539 Arabidopsis thaliana
AT3G01390 1.0kb downstream 1.0kb downstream 1000 false Chr3: 148999-149998 Arabidopsis thaliana
AT3G01390 2.0kb upstream 2.0kb upstream 3541 true Chr3: 149999-153539 Arabidopsis thaliana
AT3G01390 2.0kb upstream 2.0kb upstream 2000 false Chr3: 151540-153539 Arabidopsis thaliana
AT3G01390 2.0kb downstream 2.0kb downstream 3541 true Chr3: 147999-151539 Arabidopsis thaliana
AT3G01390 2.0kb downstream 2.0kb downstream 2000 false Chr3: 147999-149998 Arabidopsis thaliana
AT3G01390 5.0kb upstream 5.0kb upstream 6541 true Chr3: 149999-156539 Arabidopsis thaliana
AT3G01390 5.0kb upstream 5.0kb upstream 5000 false Chr3: 151540-156539 Arabidopsis thaliana
AT3G01390 5.0kb downstream 5.0kb downstream 6541 true Chr3: 144999-151539 Arabidopsis thaliana
AT3G01390 5.0kb downstream 5.0kb downstream 5000 false Chr3: 144999-149998 Arabidopsis thaliana
AT3G01390 10.0kb upstream 10.0kb upstream 11541 true Chr3: 149999-161539 Arabidopsis thaliana
AT3G01390 10.0kb upstream 10.0kb upstream 10000 false Chr3: 151540-161539 Arabidopsis thaliana
AT3G01390 10.0kb downstream 10.0kb downstream 11541 true Chr3: 139999-151539 Arabidopsis thaliana
AT3G01390 10.0kb downstream 10.0kb downstream 10000 false Chr3: 139999-149998 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041228 5273 Angiosperm View MSA
122376644 5261 Brassicaceae View MSA
123836363 5264 Brassicales-Malvales View MSA
124350151 5266 SBM View MSA
124238118 5268 Malvidae View MSA
124071685 5270 Rosid View MSA
123752042 5271 Pentapetalae View MSA
122795974 5272 Eudicot View MSA
121344962 5274 Embryophyte View MSA
123424179 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 46.124     High High
cufflinks 20.913        
cufflinks 37.247     High  
cufflinks 19.447        
cufflinks 27.764     High  
cufflinks 20.385        

0 Strain