Gene : Nek7 A. thaliana TAIR10
Primary Identifier:  ? AT3G12200 Defline:  (1 of 1) PTHR24362:SF201 - SERINE/THREONINE-PROTEIN KINASE NEK2-RELATED
Genomic Order:  1200 Name:  ? AT3G12200
Secondary Identifier:  ? PAC:19663501
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12200 0.5kb upstream 0.5kb upstream 4509 true Chr3: 3886992-3891500 Arabidopsis thaliana
AT3G12200 0.5kb upstream 0.5kb upstream 500 false Chr3: 3891001-3891500 Arabidopsis thaliana
AT3G12200 0.5kb downstream 0.5kb downstream 4509 true Chr3: 3886492-3891000 Arabidopsis thaliana
AT3G12200 0.5kb downstream 0.5kb downstream 500 false Chr3: 3886492-3886991 Arabidopsis thaliana
AT3G12200 1.0kb upstream 1.0kb upstream 5009 true Chr3: 3886992-3892000 Arabidopsis thaliana
AT3G12200 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3891001-3892000 Arabidopsis thaliana
AT3G12200 1.0kb downstream 1.0kb downstream 5009 true Chr3: 3885992-3891000 Arabidopsis thaliana
AT3G12200 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3885992-3886991 Arabidopsis thaliana
AT3G12200 2.0kb upstream 2.0kb upstream 6009 true Chr3: 3886992-3893000 Arabidopsis thaliana
AT3G12200 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3891001-3893000 Arabidopsis thaliana
AT3G12200 2.0kb downstream 2.0kb downstream 6009 true Chr3: 3884992-3891000 Arabidopsis thaliana
AT3G12200 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3884992-3886991 Arabidopsis thaliana
AT3G12200 5.0kb upstream 5.0kb upstream 9009 true Chr3: 3886992-3896000 Arabidopsis thaliana
AT3G12200 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3891001-3896000 Arabidopsis thaliana
AT3G12200 5.0kb downstream 5.0kb downstream 9009 true Chr3: 3881992-3891000 Arabidopsis thaliana
AT3G12200 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3881992-3886991 Arabidopsis thaliana
AT3G12200 10.0kb upstream 10.0kb upstream 14009 true Chr3: 3886992-3901000 Arabidopsis thaliana
AT3G12200 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3891001-3901000 Arabidopsis thaliana
AT3G12200 10.0kb downstream 10.0kb downstream 14009 true Chr3: 3876992-3891000 Arabidopsis thaliana
AT3G12200 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3876992-3886991 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365235 5261 Brassicaceae View MSA
123838265 5264 Brassicales-Malvales View MSA
124347853 5266 SBM View MSA
124253005 5268 Malvidae View MSA
124069702 5270 Rosid View MSA
123749307 5271 Pentapetalae View MSA
122794727 5272 Eudicot View MSA
122049152 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351770 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.97        
cufflinks 13.448       High
cufflinks 5.005       Low
cufflinks 10.342        
cufflinks 5.298        
cufflinks 14.134       High

0 Strain