Gene : PRXIIF A. thaliana TAIR10
Primary Identifier:  ? AT3G06050 Defline:  (1 of 1) 1.11.1.15//1.11.1.7 - Peroxiredoxin / TXNPx // Peroxidase / Lactoperoxidase
Genomic Order:  579 Name:  ? AT3G06050
Secondary Identifier:  ? PAC:19661111
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5466 Arabidopsis thaliana pathologic  
Athaliana PWY-7214 Arabidopsis thaliana pathologic  
Athaliana PWY-7445 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G06050 0.5kb upstream 0.5kb upstream 2289 true Chr3: 1826073-1828361 Arabidopsis thaliana
AT3G06050 0.5kb upstream 0.5kb upstream 500 false Chr3: 1827862-1828361 Arabidopsis thaliana
AT3G06050 0.5kb downstream 0.5kb downstream 2289 true Chr3: 1825573-1827861 Arabidopsis thaliana
AT3G06050 0.5kb downstream 0.5kb downstream 500 false Chr3: 1825573-1826072 Arabidopsis thaliana
AT3G06050 1.0kb upstream 1.0kb upstream 2789 true Chr3: 1826073-1828861 Arabidopsis thaliana
AT3G06050 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1827862-1828861 Arabidopsis thaliana
AT3G06050 1.0kb downstream 1.0kb downstream 2789 true Chr3: 1825073-1827861 Arabidopsis thaliana
AT3G06050 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1825073-1826072 Arabidopsis thaliana
AT3G06050 2.0kb upstream 2.0kb upstream 3789 true Chr3: 1826073-1829861 Arabidopsis thaliana
AT3G06050 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1827862-1829861 Arabidopsis thaliana
AT3G06050 2.0kb downstream 2.0kb downstream 3789 true Chr3: 1824073-1827861 Arabidopsis thaliana
AT3G06050 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1824073-1826072 Arabidopsis thaliana
AT3G06050 5.0kb upstream 5.0kb upstream 6789 true Chr3: 1826073-1832861 Arabidopsis thaliana
AT3G06050 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1827862-1832861 Arabidopsis thaliana
AT3G06050 5.0kb downstream 5.0kb downstream 6789 true Chr3: 1821073-1827861 Arabidopsis thaliana
AT3G06050 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1821073-1826072 Arabidopsis thaliana
AT3G06050 10.0kb upstream 10.0kb upstream 11789 true Chr3: 1826073-1837861 Arabidopsis thaliana
AT3G06050 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1827862-1837861 Arabidopsis thaliana
AT3G06050 10.0kb downstream 10.0kb downstream 11789 true Chr3: 1816073-1827861 Arabidopsis thaliana
AT3G06050 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1816073-1826072 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366670 5261 Brassicaceae View MSA
123834905 5264 Brassicales-Malvales View MSA
124337571 5266 SBM View MSA
124239207 5268 Malvidae View MSA
124063777 5270 Rosid View MSA
123739504 5271 Pentapetalae View MSA
122791343 5272 Eudicot View MSA
122044317 5273 Angiosperm View MSA
121346919 5274 Embryophyte View MSA
123427314 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 39.247     High  
cufflinks 28.254        
cufflinks 53.046     High High
cufflinks 25.873        
cufflinks 58.625     High High
cufflinks 24.293       Low

0 Strain