Gene : TRB2 A. thaliana TAIR10
Primary Identifier:  ? AT5G67580 Defline:  (1 of 3) PTHR21717//PTHR21717:SF27 - TELOMERIC REPEAT BINDING PROTEIN // TELOMERE REPEAT-BINDING FACTOR 2-RELATED
Genomic Order:  6312 Name:  ? AT5G67580
Secondary Identifier:  ? PAC:19667630
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0 Pathways

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G67580 0.5kb upstream 0.5kb upstream 3109 true Chr5: 26955135-26958243 Arabidopsis thaliana
AT5G67580 0.5kb upstream 0.5kb upstream 500 false Chr5: 26957744-26958243 Arabidopsis thaliana
AT5G67580 0.5kb downstream 0.5kb downstream 3109 true Chr5: 26954635-26957743 Arabidopsis thaliana
AT5G67580 0.5kb downstream 0.5kb downstream 500 false Chr5: 26954635-26955134 Arabidopsis thaliana
AT5G67580 1.0kb upstream 1.0kb upstream 3609 true Chr5: 26955135-26958743 Arabidopsis thaliana
AT5G67580 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26957744-26958743 Arabidopsis thaliana
AT5G67580 1.0kb downstream 1.0kb downstream 3609 true Chr5: 26954135-26957743 Arabidopsis thaliana
AT5G67580 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26954135-26955134 Arabidopsis thaliana
AT5G67580 2.0kb upstream 2.0kb upstream 4609 true Chr5: 26955135-26959743 Arabidopsis thaliana
AT5G67580 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26957744-26959743 Arabidopsis thaliana
AT5G67580 2.0kb downstream 2.0kb downstream 4609 true Chr5: 26953135-26957743 Arabidopsis thaliana
AT5G67580 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26953135-26955134 Arabidopsis thaliana
AT5G67580 5.0kb upstream 5.0kb upstream 7609 true Chr5: 26955135-26962743 Arabidopsis thaliana
AT5G67580 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26957744-26962743 Arabidopsis thaliana
AT5G67580 5.0kb downstream 5.0kb downstream 7609 true Chr5: 26950135-26957743 Arabidopsis thaliana
AT5G67580 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26950135-26955134 Arabidopsis thaliana
AT5G67580 10.0kb upstream 10.0kb upstream 12609 true Chr5: 26955135-26967743 Arabidopsis thaliana
AT5G67580 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26957744-26967743 Arabidopsis thaliana
AT5G67580 10.0kb downstream 10.0kb downstream 12609 true Chr5: 26945135-26957743 Arabidopsis thaliana
AT5G67580 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26945135-26955134 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368784 5261 Brassicaceae View MSA
123839565 5264 Brassicales-Malvales View MSA
124339833 5266 SBM View MSA
124253120 5268 Malvidae View MSA
124073708 5270 Rosid View MSA
123739242 5271 Pentapetalae View MSA
122787405 5272 Eudicot View MSA
122045775 5273 Angiosperm View MSA
121350383 5274 Embryophyte View MSA
123425799 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.706       High
cufflinks 3.7        
cufflinks 4.052        
cufflinks 4.236        
cufflinks 4.165        
cufflinks 3.285       Low

0 Strain