Gene : IAA9 A. thaliana TAIR10
Primary Identifier:  ? AT5G65670 Defline:  (1 of 1) PTHR31734:SF24 - AUXIN-RESPONSIVE PROTEIN IAA9
Genomic Order:  6102 Name:  ? AT5G65670
Secondary Identifier:  ? PAC:19668744
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G65670 0.5kb upstream 0.5kb upstream 3311 true Chr5: 26253158-26256468 Arabidopsis thaliana
AT5G65670 0.5kb upstream 0.5kb upstream 500 false Chr5: 26253158-26253657 Arabidopsis thaliana
AT5G65670 0.5kb downstream 0.5kb downstream 3311 true Chr5: 26253658-26256968 Arabidopsis thaliana
AT5G65670 0.5kb downstream 0.5kb downstream 500 false Chr5: 26256469-26256968 Arabidopsis thaliana
AT5G65670 1.0kb upstream 1.0kb upstream 3811 true Chr5: 26252658-26256468 Arabidopsis thaliana
AT5G65670 1.0kb upstream 1.0kb upstream 1000 false Chr5: 26252658-26253657 Arabidopsis thaliana
AT5G65670 1.0kb downstream 1.0kb downstream 3811 true Chr5: 26253658-26257468 Arabidopsis thaliana
AT5G65670 1.0kb downstream 1.0kb downstream 1000 false Chr5: 26256469-26257468 Arabidopsis thaliana
AT5G65670 2.0kb upstream 2.0kb upstream 4811 true Chr5: 26251658-26256468 Arabidopsis thaliana
AT5G65670 2.0kb upstream 2.0kb upstream 2000 false Chr5: 26251658-26253657 Arabidopsis thaliana
AT5G65670 2.0kb downstream 2.0kb downstream 4811 true Chr5: 26253658-26258468 Arabidopsis thaliana
AT5G65670 2.0kb downstream 2.0kb downstream 2000 false Chr5: 26256469-26258468 Arabidopsis thaliana
AT5G65670 5.0kb upstream 5.0kb upstream 7811 true Chr5: 26248658-26256468 Arabidopsis thaliana
AT5G65670 5.0kb upstream 5.0kb upstream 5000 false Chr5: 26248658-26253657 Arabidopsis thaliana
AT5G65670 5.0kb downstream 5.0kb downstream 7811 true Chr5: 26253658-26261468 Arabidopsis thaliana
AT5G65670 5.0kb downstream 5.0kb downstream 5000 false Chr5: 26256469-26261468 Arabidopsis thaliana
AT5G65670 10.0kb upstream 10.0kb upstream 12811 true Chr5: 26243658-26256468 Arabidopsis thaliana
AT5G65670 10.0kb upstream 10.0kb upstream 10000 false Chr5: 26243658-26253657 Arabidopsis thaliana
AT5G65670 10.0kb downstream 10.0kb downstream 12811 true Chr5: 26253658-26266468 Arabidopsis thaliana
AT5G65670 10.0kb downstream 10.0kb downstream 10000 false Chr5: 26256469-26266468 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362987 5261 Brassicaceae View MSA
123832414 5264 Brassicales-Malvales View MSA
124338788 5266 SBM View MSA
124251005 5268 Malvidae View MSA
124070814 5270 Rosid View MSA
123750768 5271 Pentapetalae View MSA
122791591 5272 Eudicot View MSA
122051273 5273 Angiosperm View MSA
121350717 5274 Embryophyte View MSA
123381856 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 52.123     High  
cufflinks 186.325     High High
cufflinks 31.772     High Low
cufflinks 143.634     High  
cufflinks 30.557     High Low
cufflinks 173.394     High  

0 Strain