Gene : NDPK2 A. thaliana TAIR10
Primary Identifier:  ? AT5G63310 Defline:  (1 of 1) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC
Genomic Order:  5847 Name:  ? AT5G63310
Secondary Identifier:  ? PAC:19666969
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-162 Arabidopsis thaliana pathologic  
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-6545 Arabidopsis thaliana pathologic  
Athaliana PWY-7176 Arabidopsis thaliana pathologic  
Athaliana PWY-7184 Arabidopsis thaliana pathologic  
Athaliana PWY-7196 Arabidopsis thaliana pathologic  
Athaliana PWY-7197 Arabidopsis thaliana pathologic  
Athaliana PWY-7200 Arabidopsis thaliana pathologic  
Athaliana PWY-7205 Arabidopsis thaliana pathologic  
Athaliana PWY-7208 Arabidopsis thaliana pathologic  
Athaliana PWY-7210 Arabidopsis thaliana pathologic  
Athaliana PWY-7211 Arabidopsis thaliana pathologic  
Athaliana PWY-7220 Arabidopsis thaliana pathologic  
Athaliana PWY-7221 Arabidopsis thaliana pathologic  
Athaliana PWY-7222 Arabidopsis thaliana pathologic  
Athaliana PWY-7224 Arabidopsis thaliana pathologic  
Athaliana PWY-7226 Arabidopsis thaliana pathologic  
Athaliana PWY-7227 Arabidopsis thaliana pathologic  
Athaliana PWY-7228 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G63310 0.5kb upstream 0.5kb upstream 2458 true Chr5: 25371904-25374361 Arabidopsis thaliana
AT5G63310 0.5kb upstream 0.5kb upstream 500 false Chr5: 25373862-25374361 Arabidopsis thaliana
AT5G63310 0.5kb downstream 0.5kb downstream 2458 true Chr5: 25371404-25373861 Arabidopsis thaliana
AT5G63310 0.5kb downstream 0.5kb downstream 500 false Chr5: 25371404-25371903 Arabidopsis thaliana
AT5G63310 1.0kb upstream 1.0kb upstream 2958 true Chr5: 25371904-25374861 Arabidopsis thaliana
AT5G63310 1.0kb upstream 1.0kb upstream 1000 false Chr5: 25373862-25374861 Arabidopsis thaliana
AT5G63310 1.0kb downstream 1.0kb downstream 2958 true Chr5: 25370904-25373861 Arabidopsis thaliana
AT5G63310 1.0kb downstream 1.0kb downstream 1000 false Chr5: 25370904-25371903 Arabidopsis thaliana
AT5G63310 2.0kb upstream 2.0kb upstream 3958 true Chr5: 25371904-25375861 Arabidopsis thaliana
AT5G63310 2.0kb upstream 2.0kb upstream 2000 false Chr5: 25373862-25375861 Arabidopsis thaliana
AT5G63310 2.0kb downstream 2.0kb downstream 3958 true Chr5: 25369904-25373861 Arabidopsis thaliana
AT5G63310 2.0kb downstream 2.0kb downstream 2000 false Chr5: 25369904-25371903 Arabidopsis thaliana
AT5G63310 5.0kb upstream 5.0kb upstream 6958 true Chr5: 25371904-25378861 Arabidopsis thaliana
AT5G63310 5.0kb upstream 5.0kb upstream 5000 false Chr5: 25373862-25378861 Arabidopsis thaliana
AT5G63310 5.0kb downstream 5.0kb downstream 6958 true Chr5: 25366904-25373861 Arabidopsis thaliana
AT5G63310 5.0kb downstream 5.0kb downstream 5000 false Chr5: 25366904-25371903 Arabidopsis thaliana
AT5G63310 10.0kb upstream 10.0kb upstream 11958 true Chr5: 25371904-25383861 Arabidopsis thaliana
AT5G63310 10.0kb upstream 10.0kb upstream 10000 false Chr5: 25373862-25383861 Arabidopsis thaliana
AT5G63310 10.0kb downstream 10.0kb downstream 11958 true Chr5: 25361904-25373861 Arabidopsis thaliana
AT5G63310 10.0kb downstream 10.0kb downstream 10000 false Chr5: 25361904-25371903 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372106 5261 Brassicaceae View MSA
123832017 5264 Brassicales-Malvales View MSA
124342170 5266 SBM View MSA
124242132 5268 Malvidae View MSA
124063920 5270 Rosid View MSA
123743535 5271 Pentapetalae View MSA
122788809 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.244     High  
cufflinks 16.249        
cufflinks 87.601     High High
cufflinks 10.666       Low
cufflinks 57.698     High  
cufflinks 15.032        

0 Strain