Gene : PRR3 A. thaliana TAIR10
Primary Identifier:  ? AT5G60100 Defline:  (1 of 1) K12131 - pseudo-response regulator 3 (PRR3)
Genomic Order:  5506 Name:  ? AT5G60100
Secondary Identifier:  ? PAC:19669706
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60100 0.5kb upstream 0.5kb upstream 3907 true Chr5: 24197998-24201904 Arabidopsis thaliana
AT5G60100 0.5kb upstream 0.5kb upstream 500 false Chr5: 24201405-24201904 Arabidopsis thaliana
AT5G60100 0.5kb downstream 0.5kb downstream 3907 true Chr5: 24197498-24201404 Arabidopsis thaliana
AT5G60100 0.5kb downstream 0.5kb downstream 500 false Chr5: 24197498-24197997 Arabidopsis thaliana
AT5G60100 1.0kb upstream 1.0kb upstream 4407 true Chr5: 24197998-24202404 Arabidopsis thaliana
AT5G60100 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24201405-24202404 Arabidopsis thaliana
AT5G60100 1.0kb downstream 1.0kb downstream 4407 true Chr5: 24196998-24201404 Arabidopsis thaliana
AT5G60100 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24196998-24197997 Arabidopsis thaliana
AT5G60100 2.0kb upstream 2.0kb upstream 5407 true Chr5: 24197998-24203404 Arabidopsis thaliana
AT5G60100 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24201405-24203404 Arabidopsis thaliana
AT5G60100 2.0kb downstream 2.0kb downstream 5407 true Chr5: 24195998-24201404 Arabidopsis thaliana
AT5G60100 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24195998-24197997 Arabidopsis thaliana
AT5G60100 5.0kb upstream 5.0kb upstream 8407 true Chr5: 24197998-24206404 Arabidopsis thaliana
AT5G60100 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24201405-24206404 Arabidopsis thaliana
AT5G60100 5.0kb downstream 5.0kb downstream 8407 true Chr5: 24192998-24201404 Arabidopsis thaliana
AT5G60100 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24192998-24197997 Arabidopsis thaliana
AT5G60100 10.0kb upstream 10.0kb upstream 13407 true Chr5: 24197998-24211404 Arabidopsis thaliana
AT5G60100 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24201405-24211404 Arabidopsis thaliana
AT5G60100 10.0kb downstream 10.0kb downstream 13407 true Chr5: 24187998-24201404 Arabidopsis thaliana
AT5G60100 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24187998-24197997 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368084 5261 Brassicaceae View MSA
123799483 5264 Brassicales-Malvales View MSA
124296999 5266 SBM View MSA
124149001 5268 Malvidae View MSA
123874891 5270 Rosid View MSA
123751325 5271 Pentapetalae View MSA
122791415 5272 Eudicot View MSA
122041545 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121348343 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.904        
cufflinks 3.493        
cufflinks 10.512       High
cufflinks 2.543       Low
cufflinks 7.587        
cufflinks 2.441       Low

0 Strain