Gene : ARF4 A. thaliana TAIR10
Primary Identifier:  ? AT5G60450 Defline:  (1 of 1) PTHR31384//PTHR31384:SF20 - FAMILY NOT NAMED // AUXIN RESPONSE FACTOR 4
Genomic Order:  5542 Name:  ? AT5G60450
Secondary Identifier:  ? PAC:19665856
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G60450 0.5kb upstream 0.5kb upstream 4877 true Chr5: 24308322-24313198 Arabidopsis thaliana
AT5G60450 0.5kb upstream 0.5kb upstream 500 false Chr5: 24312699-24313198 Arabidopsis thaliana
AT5G60450 0.5kb downstream 0.5kb downstream 4877 true Chr5: 24307822-24312698 Arabidopsis thaliana
AT5G60450 0.5kb downstream 0.5kb downstream 500 false Chr5: 24307822-24308321 Arabidopsis thaliana
AT5G60450 1.0kb upstream 1.0kb upstream 5377 true Chr5: 24308322-24313698 Arabidopsis thaliana
AT5G60450 1.0kb upstream 1.0kb upstream 1000 false Chr5: 24312699-24313698 Arabidopsis thaliana
AT5G60450 1.0kb downstream 1.0kb downstream 5377 true Chr5: 24307322-24312698 Arabidopsis thaliana
AT5G60450 1.0kb downstream 1.0kb downstream 1000 false Chr5: 24307322-24308321 Arabidopsis thaliana
AT5G60450 2.0kb upstream 2.0kb upstream 6377 true Chr5: 24308322-24314698 Arabidopsis thaliana
AT5G60450 2.0kb upstream 2.0kb upstream 2000 false Chr5: 24312699-24314698 Arabidopsis thaliana
AT5G60450 2.0kb downstream 2.0kb downstream 6377 true Chr5: 24306322-24312698 Arabidopsis thaliana
AT5G60450 2.0kb downstream 2.0kb downstream 2000 false Chr5: 24306322-24308321 Arabidopsis thaliana
AT5G60450 5.0kb upstream 5.0kb upstream 9377 true Chr5: 24308322-24317698 Arabidopsis thaliana
AT5G60450 5.0kb upstream 5.0kb upstream 5000 false Chr5: 24312699-24317698 Arabidopsis thaliana
AT5G60450 5.0kb downstream 5.0kb downstream 9377 true Chr5: 24303322-24312698 Arabidopsis thaliana
AT5G60450 5.0kb downstream 5.0kb downstream 5000 false Chr5: 24303322-24308321 Arabidopsis thaliana
AT5G60450 10.0kb upstream 10.0kb upstream 14377 true Chr5: 24308322-24322698 Arabidopsis thaliana
AT5G60450 10.0kb upstream 10.0kb upstream 10000 false Chr5: 24312699-24322698 Arabidopsis thaliana
AT5G60450 10.0kb downstream 10.0kb downstream 14377 true Chr5: 24298322-24312698 Arabidopsis thaliana
AT5G60450 10.0kb downstream 10.0kb downstream 10000 false Chr5: 24298322-24308321 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368839 5261 Brassicaceae View MSA
123831059 5264 Brassicales-Malvales View MSA
124343477 5266 SBM View MSA
124241726 5268 Malvidae View MSA
124066923 5270 Rosid View MSA
123747350 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.606        
cufflinks 27.019        
cufflinks 10.662        
cufflinks 34.576     High High
cufflinks 8.535       Low
cufflinks 25.889        

0 Strain