Gene : XBAT32 A. thaliana TAIR10
Primary Identifier:  ? AT5G57740 Defline:  (1 of 2) K19044 - E3 ubiquitin-protein ligase XBAT32/33 [EC:6.3.2.19] (XBAT32_33)
Genomic Order:  5257 Name:  ? AT5G57740
Secondary Identifier:  ? PAC:19668078
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G57740 0.5kb upstream 0.5kb upstream 3566 true Chr5: 23394585-23398150 Arabidopsis thaliana
AT5G57740 0.5kb upstream 0.5kb upstream 500 false Chr5: 23397651-23398150 Arabidopsis thaliana
AT5G57740 0.5kb downstream 0.5kb downstream 3566 true Chr5: 23394085-23397650 Arabidopsis thaliana
AT5G57740 0.5kb downstream 0.5kb downstream 500 false Chr5: 23394085-23394584 Arabidopsis thaliana
AT5G57740 1.0kb upstream 1.0kb upstream 4066 true Chr5: 23394585-23398650 Arabidopsis thaliana
AT5G57740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 23397651-23398650 Arabidopsis thaliana
AT5G57740 1.0kb downstream 1.0kb downstream 4066 true Chr5: 23393585-23397650 Arabidopsis thaliana
AT5G57740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 23393585-23394584 Arabidopsis thaliana
AT5G57740 2.0kb upstream 2.0kb upstream 5066 true Chr5: 23394585-23399650 Arabidopsis thaliana
AT5G57740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 23397651-23399650 Arabidopsis thaliana
AT5G57740 2.0kb downstream 2.0kb downstream 5066 true Chr5: 23392585-23397650 Arabidopsis thaliana
AT5G57740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 23392585-23394584 Arabidopsis thaliana
AT5G57740 5.0kb upstream 5.0kb upstream 8066 true Chr5: 23394585-23402650 Arabidopsis thaliana
AT5G57740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 23397651-23402650 Arabidopsis thaliana
AT5G57740 5.0kb downstream 5.0kb downstream 8066 true Chr5: 23389585-23397650 Arabidopsis thaliana
AT5G57740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 23389585-23394584 Arabidopsis thaliana
AT5G57740 10.0kb upstream 10.0kb upstream 13066 true Chr5: 23394585-23407650 Arabidopsis thaliana
AT5G57740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 23397651-23407650 Arabidopsis thaliana
AT5G57740 10.0kb downstream 10.0kb downstream 13066 true Chr5: 23384585-23397650 Arabidopsis thaliana
AT5G57740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 23384585-23394584 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381613 5261 Brassicaceae View MSA
123834473 5264 Brassicales-Malvales View MSA
124338398 5266 SBM View MSA
124250431 5268 Malvidae View MSA
124065339 5270 Rosid View MSA
123745814 5271 Pentapetalae View MSA
122792520 5272 Eudicot View MSA
122050573 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348775 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.531        
cufflinks 8.659        
cufflinks 1.977       Low
cufflinks 7.167        
cufflinks 2.339        
cufflinks 9.766       High

0 Strain