Gene : AT5G50370 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23359//PTHR23359:SF99 - NUCLEOTIDE KINASE // SUBFAMILY NOT NAMED Genomic Order:  4458
Name:  ? AT5G50370 Secondary Identifier:  ? PAC:19666326
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-7219 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G50370 0.5kb upstream 0.5kb upstream 2045 true Chr5: 20509159-20511203 Arabidopsis thaliana
AT5G50370 0.5kb upstream 0.5kb upstream 500 false Chr5: 20510704-20511203 Arabidopsis thaliana
AT5G50370 0.5kb downstream 0.5kb downstream 2045 true Chr5: 20508659-20510703 Arabidopsis thaliana
AT5G50370 0.5kb downstream 0.5kb downstream 500 false Chr5: 20508659-20509158 Arabidopsis thaliana
AT5G50370 1.0kb upstream 1.0kb upstream 2545 true Chr5: 20509159-20511703 Arabidopsis thaliana
AT5G50370 1.0kb upstream 1.0kb upstream 1000 false Chr5: 20510704-20511703 Arabidopsis thaliana
AT5G50370 1.0kb downstream 1.0kb downstream 2545 true Chr5: 20508159-20510703 Arabidopsis thaliana
AT5G50370 1.0kb downstream 1.0kb downstream 1000 false Chr5: 20508159-20509158 Arabidopsis thaliana
AT5G50370 2.0kb upstream 2.0kb upstream 3545 true Chr5: 20509159-20512703 Arabidopsis thaliana
AT5G50370 2.0kb upstream 2.0kb upstream 2000 false Chr5: 20510704-20512703 Arabidopsis thaliana
AT5G50370 2.0kb downstream 2.0kb downstream 3545 true Chr5: 20507159-20510703 Arabidopsis thaliana
AT5G50370 2.0kb downstream 2.0kb downstream 2000 false Chr5: 20507159-20509158 Arabidopsis thaliana
AT5G50370 5.0kb upstream 5.0kb upstream 6545 true Chr5: 20509159-20515703 Arabidopsis thaliana
AT5G50370 5.0kb upstream 5.0kb upstream 5000 false Chr5: 20510704-20515703 Arabidopsis thaliana
AT5G50370 5.0kb downstream 5.0kb downstream 6545 true Chr5: 20504159-20510703 Arabidopsis thaliana
AT5G50370 5.0kb downstream 5.0kb downstream 5000 false Chr5: 20504159-20509158 Arabidopsis thaliana
AT5G50370 10.0kb upstream 10.0kb upstream 11545 true Chr5: 20509159-20520703 Arabidopsis thaliana
AT5G50370 10.0kb upstream 10.0kb upstream 10000 false Chr5: 20510704-20520703 Arabidopsis thaliana
AT5G50370 10.0kb downstream 10.0kb downstream 11545 true Chr5: 20499159-20510703 Arabidopsis thaliana
AT5G50370 10.0kb downstream 10.0kb downstream 10000 false Chr5: 20499159-20509158 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041419 5273 Angiosperm View MSA
122375870 5261 Brassicaceae View MSA
123838087 5264 Brassicales-Malvales View MSA
124351615 5266 SBM View MSA
124244801 5268 Malvidae View MSA
124069606 5270 Rosid View MSA
123746649 5271 Pentapetalae View MSA
122795443 5272 Eudicot View MSA
121350908 5274 Embryophyte View MSA
123427854 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.565        
cufflinks 32.55     High  
cufflinks 10.15        
cufflinks 33.868     High  
cufflinks 7.724       Low
cufflinks 39.935     High High

0 Strain