Gene : PGLP2 A. thaliana TAIR10
Primary Identifier:  ? AT5G47760 Defline:  (1 of 3) K19269 - phosphoglycolate phosphatase (PGP, PGLP)
Genomic Order:  4170 Name:  ? AT5G47760
Secondary Identifier:  ? PAC:19669987
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G47760 0.5kb upstream 0.5kb upstream 2656 true Chr5: 19342884-19345539 Arabidopsis thaliana
AT5G47760 0.5kb upstream 0.5kb upstream 500 false Chr5: 19345040-19345539 Arabidopsis thaliana
AT5G47760 0.5kb downstream 0.5kb downstream 2656 true Chr5: 19342384-19345039 Arabidopsis thaliana
AT5G47760 0.5kb downstream 0.5kb downstream 500 false Chr5: 19342384-19342883 Arabidopsis thaliana
AT5G47760 1.0kb upstream 1.0kb upstream 3156 true Chr5: 19342884-19346039 Arabidopsis thaliana
AT5G47760 1.0kb upstream 1.0kb upstream 1000 false Chr5: 19345040-19346039 Arabidopsis thaliana
AT5G47760 1.0kb downstream 1.0kb downstream 3156 true Chr5: 19341884-19345039 Arabidopsis thaliana
AT5G47760 1.0kb downstream 1.0kb downstream 1000 false Chr5: 19341884-19342883 Arabidopsis thaliana
AT5G47760 2.0kb upstream 2.0kb upstream 4156 true Chr5: 19342884-19347039 Arabidopsis thaliana
AT5G47760 2.0kb upstream 2.0kb upstream 2000 false Chr5: 19345040-19347039 Arabidopsis thaliana
AT5G47760 2.0kb downstream 2.0kb downstream 4156 true Chr5: 19340884-19345039 Arabidopsis thaliana
AT5G47760 2.0kb downstream 2.0kb downstream 2000 false Chr5: 19340884-19342883 Arabidopsis thaliana
AT5G47760 5.0kb upstream 5.0kb upstream 7156 true Chr5: 19342884-19350039 Arabidopsis thaliana
AT5G47760 5.0kb upstream 5.0kb upstream 5000 false Chr5: 19345040-19350039 Arabidopsis thaliana
AT5G47760 5.0kb downstream 5.0kb downstream 7156 true Chr5: 19337884-19345039 Arabidopsis thaliana
AT5G47760 5.0kb downstream 5.0kb downstream 5000 false Chr5: 19337884-19342883 Arabidopsis thaliana
AT5G47760 10.0kb upstream 10.0kb upstream 12156 true Chr5: 19342884-19355039 Arabidopsis thaliana
AT5G47760 10.0kb upstream 10.0kb upstream 10000 false Chr5: 19345040-19355039 Arabidopsis thaliana
AT5G47760 10.0kb downstream 10.0kb downstream 12156 true Chr5: 19332884-19345039 Arabidopsis thaliana
AT5G47760 10.0kb downstream 10.0kb downstream 10000 false Chr5: 19332884-19342883 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369532 5261 Brassicaceae View MSA
123838299 5264 Brassicales-Malvales View MSA
124349706 5266 SBM View MSA
124242402 5268 Malvidae View MSA
124065026 5270 Rosid View MSA
123739425 5271 Pentapetalae View MSA
122788860 5272 Eudicot View MSA
122049940 5273 Angiosperm View MSA
121343932 5274 Embryophyte View MSA
123425073 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.047        
cufflinks 10.077        
cufflinks 11.473       High
cufflinks 9.646        
cufflinks 10.332        
cufflinks 8.731       Low

0 Strain