Gene : AT5G45910 A. thaliana TAIR10
Defline:  (1 of 1) PTHR22835//PTHR22835:SF211 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3969
Name:  ? AT5G45910 Secondary Identifier:  ? PAC:19672770
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3301 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G45910 0.5kb upstream 0.5kb upstream 2503 true Chr5: 18620299-18622801 Arabidopsis thaliana
AT5G45910 0.5kb upstream 0.5kb upstream 500 false Chr5: 18622302-18622801 Arabidopsis thaliana
AT5G45910 0.5kb downstream 0.5kb downstream 2503 true Chr5: 18619799-18622301 Arabidopsis thaliana
AT5G45910 0.5kb downstream 0.5kb downstream 500 false Chr5: 18619799-18620298 Arabidopsis thaliana
AT5G45910 1.0kb upstream 1.0kb upstream 3003 true Chr5: 18620299-18623301 Arabidopsis thaliana
AT5G45910 1.0kb upstream 1.0kb upstream 1000 false Chr5: 18622302-18623301 Arabidopsis thaliana
AT5G45910 1.0kb downstream 1.0kb downstream 3003 true Chr5: 18619299-18622301 Arabidopsis thaliana
AT5G45910 1.0kb downstream 1.0kb downstream 1000 false Chr5: 18619299-18620298 Arabidopsis thaliana
AT5G45910 2.0kb upstream 2.0kb upstream 4003 true Chr5: 18620299-18624301 Arabidopsis thaliana
AT5G45910 2.0kb upstream 2.0kb upstream 2000 false Chr5: 18622302-18624301 Arabidopsis thaliana
AT5G45910 2.0kb downstream 2.0kb downstream 4003 true Chr5: 18618299-18622301 Arabidopsis thaliana
AT5G45910 2.0kb downstream 2.0kb downstream 2000 false Chr5: 18618299-18620298 Arabidopsis thaliana
AT5G45910 5.0kb upstream 5.0kb upstream 7003 true Chr5: 18620299-18627301 Arabidopsis thaliana
AT5G45910 5.0kb upstream 5.0kb upstream 5000 false Chr5: 18622302-18627301 Arabidopsis thaliana
AT5G45910 5.0kb downstream 5.0kb downstream 7003 true Chr5: 18615299-18622301 Arabidopsis thaliana
AT5G45910 5.0kb downstream 5.0kb downstream 5000 false Chr5: 18615299-18620298 Arabidopsis thaliana
AT5G45910 10.0kb upstream 10.0kb upstream 12003 true Chr5: 18620299-18632301 Arabidopsis thaliana
AT5G45910 10.0kb upstream 10.0kb upstream 10000 false Chr5: 18622302-18632301 Arabidopsis thaliana
AT5G45910 10.0kb downstream 10.0kb downstream 12003 true Chr5: 18610299-18622301 Arabidopsis thaliana
AT5G45910 10.0kb downstream 10.0kb downstream 10000 false Chr5: 18610299-18620298 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373057 5261 Brassicaceae View MSA
123828104 5264 Brassicales-Malvales View MSA
124349912 5266 SBM View MSA
124249732 5268 Malvidae View MSA
124068482 5270 Rosid View MSA
123752448 5271 Pentapetalae View MSA
122797509 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.023     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain