Gene : AT5G18230 A. thaliana TAIR10
Defline:  (1 of 1) K12580 - CCR4-NOT transcription complex subunit 3 (CNOT3, NOT3) Genomic Order:  1737
Name:  ? AT5G18230 Secondary Identifier:  ? PAC:19668536
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G18230 0.5kb upstream 0.5kb upstream 6306 true Chr5: 6021444-6027749 Arabidopsis thaliana
AT5G18230 0.5kb upstream 0.5kb upstream 500 false Chr5: 6027250-6027749 Arabidopsis thaliana
AT5G18230 0.5kb downstream 0.5kb downstream 6306 true Chr5: 6020944-6027249 Arabidopsis thaliana
AT5G18230 0.5kb downstream 0.5kb downstream 500 false Chr5: 6020944-6021443 Arabidopsis thaliana
AT5G18230 1.0kb upstream 1.0kb upstream 6806 true Chr5: 6021444-6028249 Arabidopsis thaliana
AT5G18230 1.0kb upstream 1.0kb upstream 1000 false Chr5: 6027250-6028249 Arabidopsis thaliana
AT5G18230 1.0kb downstream 1.0kb downstream 6806 true Chr5: 6020444-6027249 Arabidopsis thaliana
AT5G18230 1.0kb downstream 1.0kb downstream 1000 false Chr5: 6020444-6021443 Arabidopsis thaliana
AT5G18230 2.0kb upstream 2.0kb upstream 7806 true Chr5: 6021444-6029249 Arabidopsis thaliana
AT5G18230 2.0kb upstream 2.0kb upstream 2000 false Chr5: 6027250-6029249 Arabidopsis thaliana
AT5G18230 2.0kb downstream 2.0kb downstream 7806 true Chr5: 6019444-6027249 Arabidopsis thaliana
AT5G18230 2.0kb downstream 2.0kb downstream 2000 false Chr5: 6019444-6021443 Arabidopsis thaliana
AT5G18230 5.0kb upstream 5.0kb upstream 10806 true Chr5: 6021444-6032249 Arabidopsis thaliana
AT5G18230 5.0kb upstream 5.0kb upstream 5000 false Chr5: 6027250-6032249 Arabidopsis thaliana
AT5G18230 5.0kb downstream 5.0kb downstream 10806 true Chr5: 6016444-6027249 Arabidopsis thaliana
AT5G18230 5.0kb downstream 5.0kb downstream 5000 false Chr5: 6016444-6021443 Arabidopsis thaliana
AT5G18230 10.0kb upstream 10.0kb upstream 15806 true Chr5: 6021444-6037249 Arabidopsis thaliana
AT5G18230 10.0kb upstream 10.0kb upstream 10000 false Chr5: 6027250-6037249 Arabidopsis thaliana
AT5G18230 10.0kb downstream 10.0kb downstream 15806 true Chr5: 6011444-6027249 Arabidopsis thaliana
AT5G18230 10.0kb downstream 10.0kb downstream 10000 false Chr5: 6011444-6021443 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366537 5261 Brassicaceae View MSA
123832335 5264 Brassicales-Malvales View MSA
124351039 5266 SBM View MSA
124241453 5268 Malvidae View MSA
124060805 5270 Rosid View MSA
123746198 5271 Pentapetalae View MSA
122787645 5272 Eudicot View MSA
122046852 5273 Angiosperm View MSA
121349524 5274 Embryophyte View MSA
123426579 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.106        
cufflinks 10.576        
cufflinks 9.161       Low
cufflinks 11.065        
cufflinks 9.075       Low
cufflinks 11.057        

0 Strain