Gene : XPO1A A. thaliana TAIR10
Primary Identifier:  ? AT5G17020 Defline:  (1 of 2) K14290 - exportin-1 (XPO1, CRM1)
Genomic Order:  1608 Name:  ? AT5G17020
Secondary Identifier:  ? PAC:19673293
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17020 0.5kb upstream 0.5kb upstream 8732 true Chr5: 5594224-5602955 Arabidopsis thaliana
AT5G17020 0.5kb upstream 0.5kb upstream 500 false Chr5: 5594224-5594723 Arabidopsis thaliana
AT5G17020 0.5kb downstream 0.5kb downstream 8732 true Chr5: 5594724-5603455 Arabidopsis thaliana
AT5G17020 0.5kb downstream 0.5kb downstream 500 false Chr5: 5602956-5603455 Arabidopsis thaliana
AT5G17020 1.0kb upstream 1.0kb upstream 9232 true Chr5: 5593724-5602955 Arabidopsis thaliana
AT5G17020 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5593724-5594723 Arabidopsis thaliana
AT5G17020 1.0kb downstream 1.0kb downstream 9232 true Chr5: 5594724-5603955 Arabidopsis thaliana
AT5G17020 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5602956-5603955 Arabidopsis thaliana
AT5G17020 2.0kb upstream 2.0kb upstream 10232 true Chr5: 5592724-5602955 Arabidopsis thaliana
AT5G17020 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5592724-5594723 Arabidopsis thaliana
AT5G17020 2.0kb downstream 2.0kb downstream 10232 true Chr5: 5594724-5604955 Arabidopsis thaliana
AT5G17020 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5602956-5604955 Arabidopsis thaliana
AT5G17020 5.0kb upstream 5.0kb upstream 13232 true Chr5: 5589724-5602955 Arabidopsis thaliana
AT5G17020 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5589724-5594723 Arabidopsis thaliana
AT5G17020 5.0kb downstream 5.0kb downstream 13232 true Chr5: 5594724-5607955 Arabidopsis thaliana
AT5G17020 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5602956-5607955 Arabidopsis thaliana
AT5G17020 10.0kb upstream 10.0kb upstream 18232 true Chr5: 5584724-5602955 Arabidopsis thaliana
AT5G17020 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5584724-5594723 Arabidopsis thaliana
AT5G17020 10.0kb downstream 10.0kb downstream 18232 true Chr5: 5594724-5612955 Arabidopsis thaliana
AT5G17020 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5602956-5612955 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368448 5261 Brassicaceae View MSA
123841145 5264 Brassicales-Malvales View MSA
124350074 5266 SBM View MSA
124246788 5268 Malvidae View MSA
124065762 5270 Rosid View MSA
123747654 5271 Pentapetalae View MSA
122786920 5272 Eudicot View MSA
122045402 5273 Angiosperm View MSA
121344430 5274 Embryophyte View MSA
123428212 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.672        
cufflinks 10.204        
cufflinks 4.916       Low
cufflinks 10.218        
cufflinks 5.089       Low
cufflinks 11.852       High

0 Strain