Gene : AT5G17250 A. thaliana TAIR10
Defline:  (1 of 1) K05288 - phosphatidylinositol glycan, class O (PIGO) Genomic Order:  1634
Name:  ? AT5G17250 Secondary Identifier:  ? PAC:19672262
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G17250 0.5kb upstream 0.5kb upstream 5117 true Chr5: 5668900-5674016 Arabidopsis thaliana
AT5G17250 0.5kb upstream 0.5kb upstream 500 false Chr5: 5673517-5674016 Arabidopsis thaliana
AT5G17250 0.5kb downstream 0.5kb downstream 5117 true Chr5: 5668400-5673516 Arabidopsis thaliana
AT5G17250 0.5kb downstream 0.5kb downstream 500 false Chr5: 5668400-5668899 Arabidopsis thaliana
AT5G17250 1.0kb upstream 1.0kb upstream 5617 true Chr5: 5668900-5674516 Arabidopsis thaliana
AT5G17250 1.0kb upstream 1.0kb upstream 1000 false Chr5: 5673517-5674516 Arabidopsis thaliana
AT5G17250 1.0kb downstream 1.0kb downstream 5617 true Chr5: 5667900-5673516 Arabidopsis thaliana
AT5G17250 1.0kb downstream 1.0kb downstream 1000 false Chr5: 5667900-5668899 Arabidopsis thaliana
AT5G17250 2.0kb upstream 2.0kb upstream 6617 true Chr5: 5668900-5675516 Arabidopsis thaliana
AT5G17250 2.0kb upstream 2.0kb upstream 2000 false Chr5: 5673517-5675516 Arabidopsis thaliana
AT5G17250 2.0kb downstream 2.0kb downstream 6617 true Chr5: 5666900-5673516 Arabidopsis thaliana
AT5G17250 2.0kb downstream 2.0kb downstream 2000 false Chr5: 5666900-5668899 Arabidopsis thaliana
AT5G17250 5.0kb upstream 5.0kb upstream 9617 true Chr5: 5668900-5678516 Arabidopsis thaliana
AT5G17250 5.0kb upstream 5.0kb upstream 5000 false Chr5: 5673517-5678516 Arabidopsis thaliana
AT5G17250 5.0kb downstream 5.0kb downstream 9617 true Chr5: 5663900-5673516 Arabidopsis thaliana
AT5G17250 5.0kb downstream 5.0kb downstream 5000 false Chr5: 5663900-5668899 Arabidopsis thaliana
AT5G17250 10.0kb upstream 10.0kb upstream 14617 true Chr5: 5668900-5683516 Arabidopsis thaliana
AT5G17250 10.0kb upstream 10.0kb upstream 10000 false Chr5: 5673517-5683516 Arabidopsis thaliana
AT5G17250 10.0kb downstream 10.0kb downstream 14617 true Chr5: 5658900-5673516 Arabidopsis thaliana
AT5G17250 10.0kb downstream 10.0kb downstream 10000 false Chr5: 5658900-5668899 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360962 5261 Brassicaceae View MSA
123832588 5264 Brassicales-Malvales View MSA
124340757 5266 SBM View MSA
124240987 5268 Malvidae View MSA
124060946 5270 Rosid View MSA
123738911 5271 Pentapetalae View MSA
122791946 5272 Eudicot View MSA
122044137 5273 Angiosperm View MSA
121345905 5274 Embryophyte View MSA
123425893 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.382        
cufflinks 4.249        
cufflinks 2.116       Low
cufflinks 4.006        
cufflinks 2.092       Low
cufflinks 4.236        

0 Strain