Gene : COP13 A. thaliana TAIR10
Primary Identifier:  ? AT5G14250 Defline:  (1 of 1) K12177 - COP9 signalosome complex subunit 3 (COPS3, CSN3)
Genomic Order:  1321 Name:  ? AT5G14250
Secondary Identifier:  ? PAC:19666029
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G14250 0.5kb upstream 0.5kb upstream 3384 true Chr5: 4597378-4600761 Arabidopsis thaliana
AT5G14250 0.5kb upstream 0.5kb upstream 500 false Chr5: 4597378-4597877 Arabidopsis thaliana
AT5G14250 0.5kb downstream 0.5kb downstream 3384 true Chr5: 4597878-4601261 Arabidopsis thaliana
AT5G14250 0.5kb downstream 0.5kb downstream 500 false Chr5: 4600762-4601261 Arabidopsis thaliana
AT5G14250 1.0kb upstream 1.0kb upstream 3884 true Chr5: 4596878-4600761 Arabidopsis thaliana
AT5G14250 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4596878-4597877 Arabidopsis thaliana
AT5G14250 1.0kb downstream 1.0kb downstream 3884 true Chr5: 4597878-4601761 Arabidopsis thaliana
AT5G14250 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4600762-4601761 Arabidopsis thaliana
AT5G14250 2.0kb upstream 2.0kb upstream 4884 true Chr5: 4595878-4600761 Arabidopsis thaliana
AT5G14250 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4595878-4597877 Arabidopsis thaliana
AT5G14250 2.0kb downstream 2.0kb downstream 4884 true Chr5: 4597878-4602761 Arabidopsis thaliana
AT5G14250 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4600762-4602761 Arabidopsis thaliana
AT5G14250 5.0kb upstream 5.0kb upstream 7884 true Chr5: 4592878-4600761 Arabidopsis thaliana
AT5G14250 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4592878-4597877 Arabidopsis thaliana
AT5G14250 5.0kb downstream 5.0kb downstream 7884 true Chr5: 4597878-4605761 Arabidopsis thaliana
AT5G14250 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4600762-4605761 Arabidopsis thaliana
AT5G14250 10.0kb upstream 10.0kb upstream 12884 true Chr5: 4587878-4600761 Arabidopsis thaliana
AT5G14250 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4587878-4597877 Arabidopsis thaliana
AT5G14250 10.0kb downstream 10.0kb downstream 12884 true Chr5: 4597878-4610761 Arabidopsis thaliana
AT5G14250 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4600762-4610761 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371610 5261 Brassicaceae View MSA
123834590 5264 Brassicales-Malvales View MSA
124336586 5266 SBM View MSA
124237905 5268 Malvidae View MSA
124064786 5270 Rosid View MSA
123740588 5271 Pentapetalae View MSA
122788709 5272 Eudicot View MSA
122049290 5273 Angiosperm View MSA
121345977 5274 Embryophyte View MSA
123425209 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.931        
cufflinks 7.0        
cufflinks 5.558       Low
cufflinks 7.832       High
cufflinks 5.778        
cufflinks 7.497        

0 Strain