Gene : SUVH4 A. thaliana TAIR10
Primary Identifier:  ? AT5G13960 Defline:  (1 of 1) PTHR22884//PTHR22884:SF352 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4
Genomic Order:  1291 Name:  ? AT5G13960
Secondary Identifier:  ? PAC:19668094
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G13960 0.5kb upstream 0.5kb upstream 5242 true Chr5: 4500947-4506188 Arabidopsis thaliana
AT5G13960 0.5kb upstream 0.5kb upstream 500 false Chr5: 4500947-4501446 Arabidopsis thaliana
AT5G13960 0.5kb downstream 0.5kb downstream 5242 true Chr5: 4501447-4506688 Arabidopsis thaliana
AT5G13960 0.5kb downstream 0.5kb downstream 500 false Chr5: 4506189-4506688 Arabidopsis thaliana
AT5G13960 1.0kb upstream 1.0kb upstream 5742 true Chr5: 4500447-4506188 Arabidopsis thaliana
AT5G13960 1.0kb upstream 1.0kb upstream 1000 false Chr5: 4500447-4501446 Arabidopsis thaliana
AT5G13960 1.0kb downstream 1.0kb downstream 5742 true Chr5: 4501447-4507188 Arabidopsis thaliana
AT5G13960 1.0kb downstream 1.0kb downstream 1000 false Chr5: 4506189-4507188 Arabidopsis thaliana
AT5G13960 2.0kb upstream 2.0kb upstream 6742 true Chr5: 4499447-4506188 Arabidopsis thaliana
AT5G13960 2.0kb upstream 2.0kb upstream 2000 false Chr5: 4499447-4501446 Arabidopsis thaliana
AT5G13960 2.0kb downstream 2.0kb downstream 6742 true Chr5: 4501447-4508188 Arabidopsis thaliana
AT5G13960 2.0kb downstream 2.0kb downstream 2000 false Chr5: 4506189-4508188 Arabidopsis thaliana
AT5G13960 5.0kb upstream 5.0kb upstream 9742 true Chr5: 4496447-4506188 Arabidopsis thaliana
AT5G13960 5.0kb upstream 5.0kb upstream 5000 false Chr5: 4496447-4501446 Arabidopsis thaliana
AT5G13960 5.0kb downstream 5.0kb downstream 9742 true Chr5: 4501447-4511188 Arabidopsis thaliana
AT5G13960 5.0kb downstream 5.0kb downstream 5000 false Chr5: 4506189-4511188 Arabidopsis thaliana
AT5G13960 10.0kb upstream 10.0kb upstream 14742 true Chr5: 4491447-4506188 Arabidopsis thaliana
AT5G13960 10.0kb upstream 10.0kb upstream 10000 false Chr5: 4491447-4501446 Arabidopsis thaliana
AT5G13960 10.0kb downstream 10.0kb downstream 14742 true Chr5: 4501447-4516188 Arabidopsis thaliana
AT5G13960 10.0kb downstream 10.0kb downstream 10000 false Chr5: 4506189-4516188 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369066 5261 Brassicaceae View MSA
123831475 5264 Brassicales-Malvales View MSA
124321729 5266 SBM View MSA
124243939 5268 Malvidae View MSA
124061066 5270 Rosid View MSA
123739122 5271 Pentapetalae View MSA
122795535 5272 Eudicot View MSA
122050762 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350126 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.238        
cufflinks 5.837        
cufflinks 1.678       Low
cufflinks 5.422        
cufflinks 1.559       Low
cufflinks 5.269        

0 Strain