Gene : ACT7 A. thaliana TAIR10
Primary Identifier:  ? AT5G09810 Defline:  (1 of 1) PTHR11937//PTHR11937:SF200 - ACTIN // ACTIN-7
Genomic Order:  896 Name:  ? AT5G09810
Secondary Identifier:  ? PAC:19670344
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G09810 0.5kb upstream 0.5kb upstream 3018 true Chr5: 3051597-3054614 Arabidopsis thaliana
AT5G09810 0.5kb upstream 0.5kb upstream 500 false Chr5: 3051597-3052096 Arabidopsis thaliana
AT5G09810 0.5kb downstream 0.5kb downstream 3018 true Chr5: 3052097-3055114 Arabidopsis thaliana
AT5G09810 0.5kb downstream 0.5kb downstream 500 false Chr5: 3054615-3055114 Arabidopsis thaliana
AT5G09810 1.0kb upstream 1.0kb upstream 3518 true Chr5: 3051097-3054614 Arabidopsis thaliana
AT5G09810 1.0kb upstream 1.0kb upstream 1000 false Chr5: 3051097-3052096 Arabidopsis thaliana
AT5G09810 1.0kb downstream 1.0kb downstream 3518 true Chr5: 3052097-3055614 Arabidopsis thaliana
AT5G09810 1.0kb downstream 1.0kb downstream 1000 false Chr5: 3054615-3055614 Arabidopsis thaliana
AT5G09810 2.0kb upstream 2.0kb upstream 4518 true Chr5: 3050097-3054614 Arabidopsis thaliana
AT5G09810 2.0kb upstream 2.0kb upstream 2000 false Chr5: 3050097-3052096 Arabidopsis thaliana
AT5G09810 2.0kb downstream 2.0kb downstream 4518 true Chr5: 3052097-3056614 Arabidopsis thaliana
AT5G09810 2.0kb downstream 2.0kb downstream 2000 false Chr5: 3054615-3056614 Arabidopsis thaliana
AT5G09810 5.0kb upstream 5.0kb upstream 7518 true Chr5: 3047097-3054614 Arabidopsis thaliana
AT5G09810 5.0kb upstream 5.0kb upstream 5000 false Chr5: 3047097-3052096 Arabidopsis thaliana
AT5G09810 5.0kb downstream 5.0kb downstream 7518 true Chr5: 3052097-3059614 Arabidopsis thaliana
AT5G09810 5.0kb downstream 5.0kb downstream 5000 false Chr5: 3054615-3059614 Arabidopsis thaliana
AT5G09810 10.0kb upstream 10.0kb upstream 12518 true Chr5: 3042097-3054614 Arabidopsis thaliana
AT5G09810 10.0kb upstream 10.0kb upstream 10000 false Chr5: 3042097-3052096 Arabidopsis thaliana
AT5G09810 10.0kb downstream 10.0kb downstream 12518 true Chr5: 3052097-3064614 Arabidopsis thaliana
AT5G09810 10.0kb downstream 10.0kb downstream 10000 false Chr5: 3054615-3064614 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371887 5261 Brassicaceae View MSA
123837516 5264 Brassicales-Malvales View MSA
124338441 5266 SBM View MSA
124253278 5268 Malvidae View MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 209.518     High  
cufflinks 361.9     High  
cufflinks 168.462     High Low
cufflinks 371.132     High  
cufflinks 171.443     High Low
cufflinks 458.213     High High

0 Strain