Gene : AT5G06300 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31223//PTHR31223:SF20 - FAMILY NOT NAMED // CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE LOG7 Genomic Order:  563
Name:  ? AT5G06300 Secondary Identifier:  ? PAC:19665377
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G06300 0.5kb upstream 0.5kb upstream 4127 true Chr5: 1921744-1925870 Arabidopsis thaliana
AT5G06300 0.5kb upstream 0.5kb upstream 500 false Chr5: 1925371-1925870 Arabidopsis thaliana
AT5G06300 0.5kb downstream 0.5kb downstream 4127 true Chr5: 1921244-1925370 Arabidopsis thaliana
AT5G06300 0.5kb downstream 0.5kb downstream 500 false Chr5: 1921244-1921743 Arabidopsis thaliana
AT5G06300 1.0kb upstream 1.0kb upstream 4627 true Chr5: 1921744-1926370 Arabidopsis thaliana
AT5G06300 1.0kb upstream 1.0kb upstream 1000 false Chr5: 1925371-1926370 Arabidopsis thaliana
AT5G06300 1.0kb downstream 1.0kb downstream 4627 true Chr5: 1920744-1925370 Arabidopsis thaliana
AT5G06300 1.0kb downstream 1.0kb downstream 1000 false Chr5: 1920744-1921743 Arabidopsis thaliana
AT5G06300 2.0kb upstream 2.0kb upstream 5627 true Chr5: 1921744-1927370 Arabidopsis thaliana
AT5G06300 2.0kb upstream 2.0kb upstream 2000 false Chr5: 1925371-1927370 Arabidopsis thaliana
AT5G06300 2.0kb downstream 2.0kb downstream 5627 true Chr5: 1919744-1925370 Arabidopsis thaliana
AT5G06300 2.0kb downstream 2.0kb downstream 2000 false Chr5: 1919744-1921743 Arabidopsis thaliana
AT5G06300 5.0kb upstream 5.0kb upstream 8627 true Chr5: 1921744-1930370 Arabidopsis thaliana
AT5G06300 5.0kb upstream 5.0kb upstream 5000 false Chr5: 1925371-1930370 Arabidopsis thaliana
AT5G06300 5.0kb downstream 5.0kb downstream 8627 true Chr5: 1916744-1925370 Arabidopsis thaliana
AT5G06300 5.0kb downstream 5.0kb downstream 5000 false Chr5: 1916744-1921743 Arabidopsis thaliana
AT5G06300 10.0kb upstream 10.0kb upstream 13627 true Chr5: 1921744-1935370 Arabidopsis thaliana
AT5G06300 10.0kb upstream 10.0kb upstream 10000 false Chr5: 1925371-1935370 Arabidopsis thaliana
AT5G06300 10.0kb downstream 10.0kb downstream 13627 true Chr5: 1911744-1925370 Arabidopsis thaliana
AT5G06300 10.0kb downstream 10.0kb downstream 10000 false Chr5: 1911744-1921743 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372407 5261 Brassicaceae View MSA
123831799 5264 Brassicales-Malvales View MSA
124351065 5266 SBM View MSA
124247470 5268 Malvidae View MSA
124067446 5270 Rosid View MSA
123749751 5271 Pentapetalae View MSA
122796499 5272 Eudicot View MSA
122046742 5273 Angiosperm View MSA
121351757 5274 Embryophyte View MSA
123427506 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.225        
cufflinks 4.175        
cufflinks 0.55       Low
cufflinks 6.757       High
cufflinks 0.738        
cufflinks 3.207        

0 Strain