Gene : AT5G02050 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10826//PTHR10826:SF12 - COMPLEMENT COMPONENT 1 // SUBFAMILY NOT NAMED Genomic Order:  114
Name:  ? AT5G02050 Secondary Identifier:  ? PAC:19672302
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G02050 0.5kb upstream 0.5kb upstream 1837 true Chr5: 402987-404823 Arabidopsis thaliana
AT5G02050 0.5kb upstream 0.5kb upstream 500 false Chr5: 404324-404823 Arabidopsis thaliana
AT5G02050 0.5kb downstream 0.5kb downstream 1837 true Chr5: 402487-404323 Arabidopsis thaliana
AT5G02050 0.5kb downstream 0.5kb downstream 500 false Chr5: 402487-402986 Arabidopsis thaliana
AT5G02050 1.0kb upstream 1.0kb upstream 2337 true Chr5: 402987-405323 Arabidopsis thaliana
AT5G02050 1.0kb upstream 1.0kb upstream 1000 false Chr5: 404324-405323 Arabidopsis thaliana
AT5G02050 1.0kb downstream 1.0kb downstream 2337 true Chr5: 401987-404323 Arabidopsis thaliana
AT5G02050 1.0kb downstream 1.0kb downstream 1000 false Chr5: 401987-402986 Arabidopsis thaliana
AT5G02050 2.0kb upstream 2.0kb upstream 3337 true Chr5: 402987-406323 Arabidopsis thaliana
AT5G02050 2.0kb upstream 2.0kb upstream 2000 false Chr5: 404324-406323 Arabidopsis thaliana
AT5G02050 2.0kb downstream 2.0kb downstream 3337 true Chr5: 400987-404323 Arabidopsis thaliana
AT5G02050 2.0kb downstream 2.0kb downstream 2000 false Chr5: 400987-402986 Arabidopsis thaliana
AT5G02050 5.0kb upstream 5.0kb upstream 6337 true Chr5: 402987-409323 Arabidopsis thaliana
AT5G02050 5.0kb upstream 5.0kb upstream 5000 false Chr5: 404324-409323 Arabidopsis thaliana
AT5G02050 5.0kb downstream 5.0kb downstream 6337 true Chr5: 397987-404323 Arabidopsis thaliana
AT5G02050 5.0kb downstream 5.0kb downstream 5000 false Chr5: 397987-402986 Arabidopsis thaliana
AT5G02050 10.0kb upstream 10.0kb upstream 11337 true Chr5: 402987-414323 Arabidopsis thaliana
AT5G02050 10.0kb upstream 10.0kb upstream 10000 false Chr5: 404324-414323 Arabidopsis thaliana
AT5G02050 10.0kb downstream 10.0kb downstream 11337 true Chr5: 392987-404323 Arabidopsis thaliana
AT5G02050 10.0kb downstream 10.0kb downstream 10000 false Chr5: 392987-402986 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361295 5261 Brassicaceae View MSA
123837522 5264 Brassicales-Malvales View MSA
124350138 5266 SBM View MSA
124245137 5268 Malvidae View MSA
124063426 5270 Rosid View MSA
123740355 5271 Pentapetalae View MSA
122797199 5272 Eudicot View MSA
122041854 5273 Angiosperm View MSA
121348815 5274 Embryophyte View MSA
123426635 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.418        
cufflinks 20.96        
cufflinks 16.306        
cufflinks 25.467        
cufflinks 11.503       Low
cufflinks 31.336     High High

0 Strain