Gene : AT5G03440 A. thaliana TAIR10
Defline:  (1 of 6) PF13259 - Protein of unknown function (DUF4050) (DUF4050) Genomic Order:  258
Name:  ? AT5G03440 Secondary Identifier:  ? PAC:19672697
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G03440 0.5kb upstream 0.5kb upstream 2057 true Chr5: 856872-858928 Arabidopsis thaliana
AT5G03440 0.5kb upstream 0.5kb upstream 500 false Chr5: 858429-858928 Arabidopsis thaliana
AT5G03440 0.5kb downstream 0.5kb downstream 2057 true Chr5: 856372-858428 Arabidopsis thaliana
AT5G03440 0.5kb downstream 0.5kb downstream 500 false Chr5: 856372-856871 Arabidopsis thaliana
AT5G03440 1.0kb upstream 1.0kb upstream 2557 true Chr5: 856872-859428 Arabidopsis thaliana
AT5G03440 1.0kb upstream 1.0kb upstream 1000 false Chr5: 858429-859428 Arabidopsis thaliana
AT5G03440 1.0kb downstream 1.0kb downstream 2557 true Chr5: 855872-858428 Arabidopsis thaliana
AT5G03440 1.0kb downstream 1.0kb downstream 1000 false Chr5: 855872-856871 Arabidopsis thaliana
AT5G03440 2.0kb upstream 2.0kb upstream 3557 true Chr5: 856872-860428 Arabidopsis thaliana
AT5G03440 2.0kb upstream 2.0kb upstream 2000 false Chr5: 858429-860428 Arabidopsis thaliana
AT5G03440 2.0kb downstream 2.0kb downstream 3557 true Chr5: 854872-858428 Arabidopsis thaliana
AT5G03440 2.0kb downstream 2.0kb downstream 2000 false Chr5: 854872-856871 Arabidopsis thaliana
AT5G03440 5.0kb upstream 5.0kb upstream 6557 true Chr5: 856872-863428 Arabidopsis thaliana
AT5G03440 5.0kb upstream 5.0kb upstream 5000 false Chr5: 858429-863428 Arabidopsis thaliana
AT5G03440 5.0kb downstream 5.0kb downstream 6557 true Chr5: 851872-858428 Arabidopsis thaliana
AT5G03440 5.0kb downstream 5.0kb downstream 5000 false Chr5: 851872-856871 Arabidopsis thaliana
AT5G03440 10.0kb upstream 10.0kb upstream 11557 true Chr5: 856872-868428 Arabidopsis thaliana
AT5G03440 10.0kb upstream 10.0kb upstream 10000 false Chr5: 858429-868428 Arabidopsis thaliana
AT5G03440 10.0kb downstream 10.0kb downstream 11557 true Chr5: 846872-858428 Arabidopsis thaliana
AT5G03440 10.0kb downstream 10.0kb downstream 10000 false Chr5: 846872-856871 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360960 5261 Brassicaceae View MSA
123839655 5264 Brassicales-Malvales View MSA
124338127 5266 SBM View MSA
124249664 5268 Malvidae View MSA
124069414 5270 Rosid View MSA
123751725 5271 Pentapetalae View MSA
122774149 5272 Eudicot View MSA
122042396 5273 Angiosperm View MSA
121349400 5274 Embryophyte View MSA
123427795 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.717        
cufflinks 2.936        
cufflinks 1.89       Low
cufflinks 3.162        
cufflinks 1.788       Low
cufflinks 3.355        

0 Strain