Gene : SR1 A. thaliana TAIR10
Primary Identifier:  ? AT5G01820 Defline:  (1 of 1) PTHR24347//PTHR24347:SF238 - SERINE/THREONINE-PROTEIN KINASE // CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 14
Genomic Order:  88 Name:  ? AT5G01820
Secondary Identifier:  ? PAC:19667802
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Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01820 0.5kb upstream 0.5kb upstream 2308 true Chr5: 313193-315500 Arabidopsis thaliana
AT5G01820 0.5kb upstream 0.5kb upstream 500 false Chr5: 315001-315500 Arabidopsis thaliana
AT5G01820 0.5kb downstream 0.5kb downstream 2308 true Chr5: 312693-315000 Arabidopsis thaliana
AT5G01820 0.5kb downstream 0.5kb downstream 500 false Chr5: 312693-313192 Arabidopsis thaliana
AT5G01820 1.0kb upstream 1.0kb upstream 2808 true Chr5: 313193-316000 Arabidopsis thaliana
AT5G01820 1.0kb upstream 1.0kb upstream 1000 false Chr5: 315001-316000 Arabidopsis thaliana
AT5G01820 1.0kb downstream 1.0kb downstream 2808 true Chr5: 312193-315000 Arabidopsis thaliana
AT5G01820 1.0kb downstream 1.0kb downstream 1000 false Chr5: 312193-313192 Arabidopsis thaliana
AT5G01820 2.0kb upstream 2.0kb upstream 3808 true Chr5: 313193-317000 Arabidopsis thaliana
AT5G01820 2.0kb upstream 2.0kb upstream 2000 false Chr5: 315001-317000 Arabidopsis thaliana
AT5G01820 2.0kb downstream 2.0kb downstream 3808 true Chr5: 311193-315000 Arabidopsis thaliana
AT5G01820 2.0kb downstream 2.0kb downstream 2000 false Chr5: 311193-313192 Arabidopsis thaliana
AT5G01820 5.0kb upstream 5.0kb upstream 6808 true Chr5: 313193-320000 Arabidopsis thaliana
AT5G01820 5.0kb upstream 5.0kb upstream 5000 false Chr5: 315001-320000 Arabidopsis thaliana
AT5G01820 5.0kb downstream 5.0kb downstream 6808 true Chr5: 308193-315000 Arabidopsis thaliana
AT5G01820 5.0kb downstream 5.0kb downstream 5000 false Chr5: 308193-313192 Arabidopsis thaliana
AT5G01820 10.0kb upstream 10.0kb upstream 11808 true Chr5: 313193-325000 Arabidopsis thaliana
AT5G01820 10.0kb upstream 10.0kb upstream 10000 false Chr5: 315001-325000 Arabidopsis thaliana
AT5G01820 10.0kb downstream 10.0kb downstream 11808 true Chr5: 303193-315000 Arabidopsis thaliana
AT5G01820 10.0kb downstream 10.0kb downstream 10000 false Chr5: 303193-313192 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030258 5273 Angiosperm View MSA
122370070 5261 Brassicaceae View MSA
123834142 5264 Brassicales-Malvales View MSA
124345739 5266 SBM View MSA
124253778 5268 Malvidae View MSA
124065024 5270 Rosid View MSA
123736554 5271 Pentapetalae View MSA
122793971 5272 Eudicot View MSA
121351869 5274 Embryophyte View MSA
123382381 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.994        
cufflinks 14.956       Low
cufflinks 14.37       Low
cufflinks 27.084        
cufflinks 25.911     High  
cufflinks 25.817        

0 Strain