Gene : AT5G01740 A. thaliana TAIR10
Defline:  (1 of 2) PF07107 - Wound-induced protein WI12 (WI12) Genomic Order:  80
Name:  ? AT5G01740 Secondary Identifier:  ? PAC:19670994
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT5G01740 0.5kb upstream 0.5kb upstream 1224 true Chr5: 280222-281445 Arabidopsis thaliana
AT5G01740 0.5kb upstream 0.5kb upstream 500 false Chr5: 280222-280721 Arabidopsis thaliana
AT5G01740 0.5kb downstream 0.5kb downstream 1224 true Chr5: 280722-281945 Arabidopsis thaliana
AT5G01740 0.5kb downstream 0.5kb downstream 500 false Chr5: 281446-281945 Arabidopsis thaliana
AT5G01740 1.0kb upstream 1.0kb upstream 1724 true Chr5: 279722-281445 Arabidopsis thaliana
AT5G01740 1.0kb upstream 1.0kb upstream 1000 false Chr5: 279722-280721 Arabidopsis thaliana
AT5G01740 1.0kb downstream 1.0kb downstream 1724 true Chr5: 280722-282445 Arabidopsis thaliana
AT5G01740 1.0kb downstream 1.0kb downstream 1000 false Chr5: 281446-282445 Arabidopsis thaliana
AT5G01740 2.0kb upstream 2.0kb upstream 2724 true Chr5: 278722-281445 Arabidopsis thaliana
AT5G01740 2.0kb upstream 2.0kb upstream 2000 false Chr5: 278722-280721 Arabidopsis thaliana
AT5G01740 2.0kb downstream 2.0kb downstream 2724 true Chr5: 280722-283445 Arabidopsis thaliana
AT5G01740 2.0kb downstream 2.0kb downstream 2000 false Chr5: 281446-283445 Arabidopsis thaliana
AT5G01740 5.0kb upstream 5.0kb upstream 5724 true Chr5: 275722-281445 Arabidopsis thaliana
AT5G01740 5.0kb upstream 5.0kb upstream 5000 false Chr5: 275722-280721 Arabidopsis thaliana
AT5G01740 5.0kb downstream 5.0kb downstream 5724 true Chr5: 280722-286445 Arabidopsis thaliana
AT5G01740 5.0kb downstream 5.0kb downstream 5000 false Chr5: 281446-286445 Arabidopsis thaliana
AT5G01740 10.0kb upstream 10.0kb upstream 10724 true Chr5: 270722-281445 Arabidopsis thaliana
AT5G01740 10.0kb upstream 10.0kb upstream 10000 false Chr5: 270722-280721 Arabidopsis thaliana
AT5G01740 10.0kb downstream 10.0kb downstream 10724 true Chr5: 280722-291445 Arabidopsis thaliana
AT5G01740 10.0kb downstream 10.0kb downstream 10000 false Chr5: 281446-291445 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360204 5261 Brassicaceae View MSA
123835149 5264 Brassicales-Malvales View MSA
124345138 5266 SBM View MSA
124252781 5268 Malvidae View MSA
124064284 5270 Rosid View MSA
123747191 5271 Pentapetalae View MSA
122797528 5272 Eudicot View MSA
122049277 5273 Angiosperm View MSA
121348822 5274 Embryophyte View MSA
123381030 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.511        
cufflinks 0.25     Low Low
cufflinks 3.437        
cufflinks 0.593        
cufflinks 5.12       High
cufflinks 1.503        

0 Strain