Gene : AT4G36050 A. thaliana TAIR10
Defline:  (1 of 1) K10772 - AP endonuclease 2 (APEX2) Genomic Order:  3701
Name:  ? AT4G36050 Secondary Identifier:  ? PAC:19645198
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G36050 0.5kb upstream 0.5kb upstream 3578 true Chr4: 17051982-17055559 Arabidopsis thaliana
AT4G36050 0.5kb upstream 0.5kb upstream 500 false Chr4: 17055060-17055559 Arabidopsis thaliana
AT4G36050 0.5kb downstream 0.5kb downstream 3578 true Chr4: 17051482-17055059 Arabidopsis thaliana
AT4G36050 0.5kb downstream 0.5kb downstream 500 false Chr4: 17051482-17051981 Arabidopsis thaliana
AT4G36050 1.0kb upstream 1.0kb upstream 4078 true Chr4: 17051982-17056059 Arabidopsis thaliana
AT4G36050 1.0kb upstream 1.0kb upstream 1000 false Chr4: 17055060-17056059 Arabidopsis thaliana
AT4G36050 1.0kb downstream 1.0kb downstream 4078 true Chr4: 17050982-17055059 Arabidopsis thaliana
AT4G36050 1.0kb downstream 1.0kb downstream 1000 false Chr4: 17050982-17051981 Arabidopsis thaliana
AT4G36050 2.0kb upstream 2.0kb upstream 5078 true Chr4: 17051982-17057059 Arabidopsis thaliana
AT4G36050 2.0kb upstream 2.0kb upstream 2000 false Chr4: 17055060-17057059 Arabidopsis thaliana
AT4G36050 2.0kb downstream 2.0kb downstream 5078 true Chr4: 17049982-17055059 Arabidopsis thaliana
AT4G36050 2.0kb downstream 2.0kb downstream 2000 false Chr4: 17049982-17051981 Arabidopsis thaliana
AT4G36050 5.0kb upstream 5.0kb upstream 8078 true Chr4: 17051982-17060059 Arabidopsis thaliana
AT4G36050 5.0kb upstream 5.0kb upstream 5000 false Chr4: 17055060-17060059 Arabidopsis thaliana
AT4G36050 5.0kb downstream 5.0kb downstream 8078 true Chr4: 17046982-17055059 Arabidopsis thaliana
AT4G36050 5.0kb downstream 5.0kb downstream 5000 false Chr4: 17046982-17051981 Arabidopsis thaliana
AT4G36050 10.0kb upstream 10.0kb upstream 13078 true Chr4: 17051982-17065059 Arabidopsis thaliana
AT4G36050 10.0kb upstream 10.0kb upstream 10000 false Chr4: 17055060-17065059 Arabidopsis thaliana
AT4G36050 10.0kb downstream 10.0kb downstream 13078 true Chr4: 17041982-17055059 Arabidopsis thaliana
AT4G36050 10.0kb downstream 10.0kb downstream 10000 false Chr4: 17041982-17051981 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370200 5261 Brassicaceae View MSA
123827705 5264 Brassicales-Malvales View MSA
124338336 5266 SBM View MSA
124237342 5268 Malvidae View MSA
124063801 5270 Rosid View MSA
123745723 5271 Pentapetalae View MSA
122793429 5272 Eudicot View MSA
122042704 5273 Angiosperm View MSA
121351497 5274 Embryophyte View MSA
123426911 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.087       Low
cufflinks 3.157        
cufflinks 2.625        
cufflinks 3.361       High
cufflinks 3.032        
cufflinks 2.077       Low

0 Strain