Gene : AT4G31290 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12192//PTHR12192:SF10 - CATION TRANSPORT PROTEIN CHAC-RELATED // SUBFAMILY NOT NAMED Genomic Order:  3177
Name:  ? AT4G31290 Secondary Identifier:  ? PAC:19646866
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G31290 0.5kb upstream 0.5kb upstream 3099 true Chr4: 15185386-15188484 Arabidopsis thaliana
AT4G31290 0.5kb upstream 0.5kb upstream 500 false Chr4: 15185386-15185885 Arabidopsis thaliana
AT4G31290 0.5kb downstream 0.5kb downstream 3099 true Chr4: 15185886-15188984 Arabidopsis thaliana
AT4G31290 0.5kb downstream 0.5kb downstream 500 false Chr4: 15188485-15188984 Arabidopsis thaliana
AT4G31290 1.0kb upstream 1.0kb upstream 3599 true Chr4: 15184886-15188484 Arabidopsis thaliana
AT4G31290 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15184886-15185885 Arabidopsis thaliana
AT4G31290 1.0kb downstream 1.0kb downstream 3599 true Chr4: 15185886-15189484 Arabidopsis thaliana
AT4G31290 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15188485-15189484 Arabidopsis thaliana
AT4G31290 2.0kb upstream 2.0kb upstream 4599 true Chr4: 15183886-15188484 Arabidopsis thaliana
AT4G31290 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15183886-15185885 Arabidopsis thaliana
AT4G31290 2.0kb downstream 2.0kb downstream 4599 true Chr4: 15185886-15190484 Arabidopsis thaliana
AT4G31290 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15188485-15190484 Arabidopsis thaliana
AT4G31290 5.0kb upstream 5.0kb upstream 7599 true Chr4: 15180886-15188484 Arabidopsis thaliana
AT4G31290 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15180886-15185885 Arabidopsis thaliana
AT4G31290 5.0kb downstream 5.0kb downstream 7599 true Chr4: 15185886-15193484 Arabidopsis thaliana
AT4G31290 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15188485-15193484 Arabidopsis thaliana
AT4G31290 10.0kb upstream 10.0kb upstream 12599 true Chr4: 15175886-15188484 Arabidopsis thaliana
AT4G31290 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15175886-15185885 Arabidopsis thaliana
AT4G31290 10.0kb downstream 10.0kb downstream 12599 true Chr4: 15185886-15198484 Arabidopsis thaliana
AT4G31290 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15188485-15198484 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367172 5261 Brassicaceae View MSA
123840623 5264 Brassicales-Malvales View MSA
124344052 5266 SBM View MSA
124239575 5268 Malvidae View MSA
124064696 5270 Rosid View MSA
123751581 5271 Pentapetalae View MSA
122789241 5272 Eudicot View MSA
122047820 5273 Angiosperm View MSA
121346610 5274 Embryophyte View MSA
123426702 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.836       Low
cufflinks 27.492        
cufflinks 33.0     High  
cufflinks 45.896     High High
cufflinks 29.529     High  
cufflinks 27.871        

0 Strain