Gene : AT4G27120 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13270 - PROTEIN C20ORF116-RELATED Genomic Order:  2722
Name:  ? AT4G27120 Secondary Identifier:  ? PAC:19647494
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27120 0.5kb upstream 0.5kb upstream 2958 true Chr4: 13601970-13604927 Arabidopsis thaliana
AT4G27120 0.5kb upstream 0.5kb upstream 500 false Chr4: 13604428-13604927 Arabidopsis thaliana
AT4G27120 0.5kb downstream 0.5kb downstream 2958 true Chr4: 13601470-13604427 Arabidopsis thaliana
AT4G27120 0.5kb downstream 0.5kb downstream 500 false Chr4: 13601470-13601969 Arabidopsis thaliana
AT4G27120 1.0kb upstream 1.0kb upstream 3458 true Chr4: 13601970-13605427 Arabidopsis thaliana
AT4G27120 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13604428-13605427 Arabidopsis thaliana
AT4G27120 1.0kb downstream 1.0kb downstream 3458 true Chr4: 13600970-13604427 Arabidopsis thaliana
AT4G27120 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13600970-13601969 Arabidopsis thaliana
AT4G27120 2.0kb upstream 2.0kb upstream 4458 true Chr4: 13601970-13606427 Arabidopsis thaliana
AT4G27120 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13604428-13606427 Arabidopsis thaliana
AT4G27120 2.0kb downstream 2.0kb downstream 4458 true Chr4: 13599970-13604427 Arabidopsis thaliana
AT4G27120 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13599970-13601969 Arabidopsis thaliana
AT4G27120 5.0kb upstream 5.0kb upstream 7458 true Chr4: 13601970-13609427 Arabidopsis thaliana
AT4G27120 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13604428-13609427 Arabidopsis thaliana
AT4G27120 5.0kb downstream 5.0kb downstream 7458 true Chr4: 13596970-13604427 Arabidopsis thaliana
AT4G27120 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13596970-13601969 Arabidopsis thaliana
AT4G27120 10.0kb upstream 10.0kb upstream 12458 true Chr4: 13601970-13614427 Arabidopsis thaliana
AT4G27120 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13604428-13614427 Arabidopsis thaliana
AT4G27120 10.0kb downstream 10.0kb downstream 12458 true Chr4: 13591970-13604427 Arabidopsis thaliana
AT4G27120 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13591970-13601969 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370851 5261 Brassicaceae View MSA
123841557 5264 Brassicales-Malvales View MSA
124341522 5266 SBM View MSA
124251142 5268 Malvidae View MSA
124064342 5270 Rosid View MSA
123740748 5271 Pentapetalae View MSA
122787568 5272 Eudicot View MSA
122042845 5273 Angiosperm View MSA
121345530 5274 Embryophyte View MSA
123425622 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.802        
cufflinks 7.06        
cufflinks 5.299       Low
cufflinks 7.506       High
cufflinks 5.341       Low
cufflinks 6.85        

0 Strain