Gene : CRF2 A. thaliana TAIR10
Primary Identifier:  ? AT4G23750 Defline:  (1 of 2) PTHR31194//PTHR31194:SF16 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED
Genomic Order:  2356 Name:  ? AT4G23750
Secondary Identifier:  ? PAC:19647002
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23750 0.5kb upstream 0.5kb upstream 2331 true Chr4: 12375694-12378024 Arabidopsis thaliana
AT4G23750 0.5kb upstream 0.5kb upstream 500 false Chr4: 12375694-12376193 Arabidopsis thaliana
AT4G23750 0.5kb downstream 0.5kb downstream 2331 true Chr4: 12376194-12378524 Arabidopsis thaliana
AT4G23750 0.5kb downstream 0.5kb downstream 500 false Chr4: 12378025-12378524 Arabidopsis thaliana
AT4G23750 1.0kb upstream 1.0kb upstream 2831 true Chr4: 12375194-12378024 Arabidopsis thaliana
AT4G23750 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12375194-12376193 Arabidopsis thaliana
AT4G23750 1.0kb downstream 1.0kb downstream 2831 true Chr4: 12376194-12379024 Arabidopsis thaliana
AT4G23750 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12378025-12379024 Arabidopsis thaliana
AT4G23750 2.0kb upstream 2.0kb upstream 3831 true Chr4: 12374194-12378024 Arabidopsis thaliana
AT4G23750 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12374194-12376193 Arabidopsis thaliana
AT4G23750 2.0kb downstream 2.0kb downstream 3831 true Chr4: 12376194-12380024 Arabidopsis thaliana
AT4G23750 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12378025-12380024 Arabidopsis thaliana
AT4G23750 5.0kb upstream 5.0kb upstream 6831 true Chr4: 12371194-12378024 Arabidopsis thaliana
AT4G23750 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12371194-12376193 Arabidopsis thaliana
AT4G23750 5.0kb downstream 5.0kb downstream 6831 true Chr4: 12376194-12383024 Arabidopsis thaliana
AT4G23750 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12378025-12383024 Arabidopsis thaliana
AT4G23750 10.0kb upstream 10.0kb upstream 11831 true Chr4: 12366194-12378024 Arabidopsis thaliana
AT4G23750 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12366194-12376193 Arabidopsis thaliana
AT4G23750 10.0kb downstream 10.0kb downstream 11831 true Chr4: 12376194-12388024 Arabidopsis thaliana
AT4G23750 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12378025-12388024 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372017 5261 Brassicaceae View MSA
123840121 5264 Brassicales-Malvales View MSA
124344965 5266 SBM View MSA
124250178 5268 Malvidae View MSA
124071112 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.067        
cufflinks 2.285        
cufflinks 1.082        
cufflinks 4.469       High
cufflinks 0.81       Low
cufflinks 3.062        

0 Strain