Gene : AT4G23900 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11349//PTHR11349:SF53 - NUCLEOSIDE DIPHOSPHATE KINASE // NUCLEOSIDE DIPHOSPHATE KINASE-RELATED Genomic Order:  2373
Name:  ? AT4G23900 Secondary Identifier:  ? PAC:19647319
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Sequence Feature Displayer

Ontology Annotation Displayer

21 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY0-162 Arabidopsis thaliana pathologic  
Athaliana PWY-6126 Arabidopsis thaliana pathologic  
Athaliana PWY-6545 Arabidopsis thaliana pathologic  
Athaliana PWY-7176 Arabidopsis thaliana pathologic  
Athaliana PWY-7184 Arabidopsis thaliana pathologic  
Athaliana PWY-7196 Arabidopsis thaliana pathologic  
Athaliana PWY-7197 Arabidopsis thaliana pathologic  
Athaliana PWY-7200 Arabidopsis thaliana pathologic  
Athaliana PWY-7205 Arabidopsis thaliana pathologic  
Athaliana PWY-7208 Arabidopsis thaliana pathologic  
Athaliana PWY-7210 Arabidopsis thaliana pathologic  
Athaliana PWY-7211 Arabidopsis thaliana pathologic  
Athaliana PWY-7220 Arabidopsis thaliana pathologic  
Athaliana PWY-7221 Arabidopsis thaliana pathologic  
Athaliana PWY-7222 Arabidopsis thaliana pathologic  
Athaliana PWY-7224 Arabidopsis thaliana pathologic  
Athaliana PWY-7226 Arabidopsis thaliana pathologic  
Athaliana PWY-7227 Arabidopsis thaliana pathologic  
Athaliana PWY-7228 Arabidopsis thaliana pathologic  
Athaliana PWY-7229 Arabidopsis thaliana pathologic  
Athaliana PWY-841 Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G23900 0.5kb upstream 0.5kb upstream 2578 true Chr4: 12423951-12426528 Arabidopsis thaliana
AT4G23900 0.5kb upstream 0.5kb upstream 500 false Chr4: 12423951-12424450 Arabidopsis thaliana
AT4G23900 0.5kb downstream 0.5kb downstream 2578 true Chr4: 12424451-12427028 Arabidopsis thaliana
AT4G23900 0.5kb downstream 0.5kb downstream 500 false Chr4: 12426529-12427028 Arabidopsis thaliana
AT4G23900 1.0kb upstream 1.0kb upstream 3078 true Chr4: 12423451-12426528 Arabidopsis thaliana
AT4G23900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12423451-12424450 Arabidopsis thaliana
AT4G23900 1.0kb downstream 1.0kb downstream 3078 true Chr4: 12424451-12427528 Arabidopsis thaliana
AT4G23900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12426529-12427528 Arabidopsis thaliana
AT4G23900 2.0kb upstream 2.0kb upstream 4078 true Chr4: 12422451-12426528 Arabidopsis thaliana
AT4G23900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12422451-12424450 Arabidopsis thaliana
AT4G23900 2.0kb downstream 2.0kb downstream 4078 true Chr4: 12424451-12428528 Arabidopsis thaliana
AT4G23900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12426529-12428528 Arabidopsis thaliana
AT4G23900 5.0kb upstream 5.0kb upstream 7078 true Chr4: 12419451-12426528 Arabidopsis thaliana
AT4G23900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12419451-12424450 Arabidopsis thaliana
AT4G23900 5.0kb downstream 5.0kb downstream 7078 true Chr4: 12424451-12431528 Arabidopsis thaliana
AT4G23900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12426529-12431528 Arabidopsis thaliana
AT4G23900 10.0kb upstream 10.0kb upstream 12078 true Chr4: 12414451-12426528 Arabidopsis thaliana
AT4G23900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12414451-12424450 Arabidopsis thaliana
AT4G23900 10.0kb downstream 10.0kb downstream 12078 true Chr4: 12424451-12436528 Arabidopsis thaliana
AT4G23900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12426529-12436528 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378835 5261 Brassicaceae View MSA
123828866 5264 Brassicales-Malvales View MSA
124337137 5266 SBM View MSA
124238363 5268 Malvidae View MSA
124068099 5270 Rosid View MSA
123749251 5271 Pentapetalae View MSA
122792257 5272 Eudicot View MSA
122050213 5273 Angiosperm View MSA
123428962 5275 Viridiplantae View MSA
121346571 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.03     Low High
cufflinks 0.013     Low  
cufflinks 0.022     Low  

0 Strain