Gene : CPK15 A. thaliana TAIR10
Primary Identifier:  ? AT4G21940 Defline:  (1 of 6) PTHR24349:SF23 - MAP KINASE-ACTIVATED PROTEIN KINASE 5
Genomic Order:  2156 Name:  ? AT4G21940
Secondary Identifier:  ? PAC:19647496
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G21940 0.5kb upstream 0.5kb upstream 3461 true Chr4: 11640302-11643762 Arabidopsis thaliana
AT4G21940 0.5kb upstream 0.5kb upstream 500 false Chr4: 11640302-11640801 Arabidopsis thaliana
AT4G21940 0.5kb downstream 0.5kb downstream 3461 true Chr4: 11640802-11644262 Arabidopsis thaliana
AT4G21940 0.5kb downstream 0.5kb downstream 500 false Chr4: 11643763-11644262 Arabidopsis thaliana
AT4G21940 1.0kb upstream 1.0kb upstream 3961 true Chr4: 11639802-11643762 Arabidopsis thaliana
AT4G21940 1.0kb upstream 1.0kb upstream 1000 false Chr4: 11639802-11640801 Arabidopsis thaliana
AT4G21940 1.0kb downstream 1.0kb downstream 3961 true Chr4: 11640802-11644762 Arabidopsis thaliana
AT4G21940 1.0kb downstream 1.0kb downstream 1000 false Chr4: 11643763-11644762 Arabidopsis thaliana
AT4G21940 2.0kb upstream 2.0kb upstream 4961 true Chr4: 11638802-11643762 Arabidopsis thaliana
AT4G21940 2.0kb upstream 2.0kb upstream 2000 false Chr4: 11638802-11640801 Arabidopsis thaliana
AT4G21940 2.0kb downstream 2.0kb downstream 4961 true Chr4: 11640802-11645762 Arabidopsis thaliana
AT4G21940 2.0kb downstream 2.0kb downstream 2000 false Chr4: 11643763-11645762 Arabidopsis thaliana
AT4G21940 5.0kb upstream 5.0kb upstream 7961 true Chr4: 11635802-11643762 Arabidopsis thaliana
AT4G21940 5.0kb upstream 5.0kb upstream 5000 false Chr4: 11635802-11640801 Arabidopsis thaliana
AT4G21940 5.0kb downstream 5.0kb downstream 7961 true Chr4: 11640802-11648762 Arabidopsis thaliana
AT4G21940 5.0kb downstream 5.0kb downstream 5000 false Chr4: 11643763-11648762 Arabidopsis thaliana
AT4G21940 10.0kb upstream 10.0kb upstream 12961 true Chr4: 11630802-11643762 Arabidopsis thaliana
AT4G21940 10.0kb upstream 10.0kb upstream 10000 false Chr4: 11630802-11640801 Arabidopsis thaliana
AT4G21940 10.0kb downstream 10.0kb downstream 12961 true Chr4: 11640802-11653762 Arabidopsis thaliana
AT4G21940 10.0kb downstream 10.0kb downstream 10000 false Chr4: 11643763-11653762 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374305 5261 Brassicaceae View MSA
123800726 5264 Brassicales-Malvales View MSA
124298100 5266 SBM View MSA
124149829 5268 Malvidae View MSA
123875559 5270 Rosid View MSA
123751027 5271 Pentapetalae View MSA
122788788 5272 Eudicot View MSA
122048153 5273 Angiosperm View MSA
121310867 5274 Embryophyte View MSA
123428456 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.027        
cufflinks 3.641       High
cufflinks 0.745       Low
cufflinks 1.602        
cufflinks 0.774       Low
cufflinks 2.844        

0 Strain