Gene : AT4G16442 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11615//PTHR11615:SF100 - NITRATE, FROMATE, IRON DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  1555
Name:  ? AT4G16442 Secondary Identifier:  ? PAC:19647416
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G16442 0.5kb upstream 0.5kb upstream 1734 true Chr4: 9271856-9273589 Arabidopsis thaliana
AT4G16442 0.5kb upstream 0.5kb upstream 500 false Chr4: 9273090-9273589 Arabidopsis thaliana
AT4G16442 0.5kb downstream 0.5kb downstream 1734 true Chr4: 9271356-9273089 Arabidopsis thaliana
AT4G16442 0.5kb downstream 0.5kb downstream 500 false Chr4: 9271356-9271855 Arabidopsis thaliana
AT4G16442 1.0kb upstream 1.0kb upstream 2234 true Chr4: 9271856-9274089 Arabidopsis thaliana
AT4G16442 1.0kb upstream 1.0kb upstream 1000 false Chr4: 9273090-9274089 Arabidopsis thaliana
AT4G16442 1.0kb downstream 1.0kb downstream 2234 true Chr4: 9270856-9273089 Arabidopsis thaliana
AT4G16442 1.0kb downstream 1.0kb downstream 1000 false Chr4: 9270856-9271855 Arabidopsis thaliana
AT4G16442 2.0kb upstream 2.0kb upstream 3234 true Chr4: 9271856-9275089 Arabidopsis thaliana
AT4G16442 2.0kb upstream 2.0kb upstream 2000 false Chr4: 9273090-9275089 Arabidopsis thaliana
AT4G16442 2.0kb downstream 2.0kb downstream 3234 true Chr4: 9269856-9273089 Arabidopsis thaliana
AT4G16442 2.0kb downstream 2.0kb downstream 2000 false Chr4: 9269856-9271855 Arabidopsis thaliana
AT4G16442 5.0kb upstream 5.0kb upstream 6234 true Chr4: 9271856-9278089 Arabidopsis thaliana
AT4G16442 5.0kb upstream 5.0kb upstream 5000 false Chr4: 9273090-9278089 Arabidopsis thaliana
AT4G16442 5.0kb downstream 5.0kb downstream 6234 true Chr4: 9266856-9273089 Arabidopsis thaliana
AT4G16442 5.0kb downstream 5.0kb downstream 5000 false Chr4: 9266856-9271855 Arabidopsis thaliana
AT4G16442 10.0kb upstream 10.0kb upstream 11234 true Chr4: 9271856-9283089 Arabidopsis thaliana
AT4G16442 10.0kb upstream 10.0kb upstream 10000 false Chr4: 9273090-9283089 Arabidopsis thaliana
AT4G16442 10.0kb downstream 10.0kb downstream 11234 true Chr4: 9261856-9273089 Arabidopsis thaliana
AT4G16442 10.0kb downstream 10.0kb downstream 10000 false Chr4: 9261856-9271855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361564 5261 Brassicaceae View MSA
123798202 5264 Brassicales-Malvales View MSA
124295873 5266 SBM View MSA
124250198 5268 Malvidae View MSA
124074610 5270 Rosid View MSA
123751007 5271 Pentapetalae View MSA
122791219 5272 Eudicot View MSA
122049002 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.32        
cufflinks 18.393        
cufflinks 9.9        
cufflinks 19.454        
cufflinks 9.276       Low
cufflinks 19.442        

0 Strain