Gene : PRD1 A. thaliana TAIR10
Primary Identifier:  ? AT4G14180 Defline:  putative recombination initiation defect 1
Genomic Order:  1270 Name:  ? AT4G14180
Secondary Identifier:  ? PAC:19647897
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14180 0.5kb upstream 0.5kb upstream 5686 true Chr4: 8177830-8183515 Arabidopsis thaliana
AT4G14180 0.5kb upstream 0.5kb upstream 500 false Chr4: 8177830-8178329 Arabidopsis thaliana
AT4G14180 0.5kb downstream 0.5kb downstream 5686 true Chr4: 8178330-8184015 Arabidopsis thaliana
AT4G14180 0.5kb downstream 0.5kb downstream 500 false Chr4: 8183516-8184015 Arabidopsis thaliana
AT4G14180 1.0kb upstream 1.0kb upstream 6186 true Chr4: 8177330-8183515 Arabidopsis thaliana
AT4G14180 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8177330-8178329 Arabidopsis thaliana
AT4G14180 1.0kb downstream 1.0kb downstream 6186 true Chr4: 8178330-8184515 Arabidopsis thaliana
AT4G14180 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8183516-8184515 Arabidopsis thaliana
AT4G14180 2.0kb upstream 2.0kb upstream 7186 true Chr4: 8176330-8183515 Arabidopsis thaliana
AT4G14180 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8176330-8178329 Arabidopsis thaliana
AT4G14180 2.0kb downstream 2.0kb downstream 7186 true Chr4: 8178330-8185515 Arabidopsis thaliana
AT4G14180 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8183516-8185515 Arabidopsis thaliana
AT4G14180 5.0kb upstream 5.0kb upstream 10186 true Chr4: 8173330-8183515 Arabidopsis thaliana
AT4G14180 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8173330-8178329 Arabidopsis thaliana
AT4G14180 5.0kb downstream 5.0kb downstream 10186 true Chr4: 8178330-8188515 Arabidopsis thaliana
AT4G14180 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8183516-8188515 Arabidopsis thaliana
AT4G14180 10.0kb upstream 10.0kb upstream 15186 true Chr4: 8168330-8183515 Arabidopsis thaliana
AT4G14180 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8168330-8178329 Arabidopsis thaliana
AT4G14180 10.0kb downstream 10.0kb downstream 15186 true Chr4: 8178330-8193515 Arabidopsis thaliana
AT4G14180 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8183516-8193515 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375230 5261 Brassicaceae View MSA
123830400 5264 Brassicales-Malvales View MSA
124343343 5266 SBM View MSA
124238780 5268 Malvidae View MSA
124062223 5270 Rosid View MSA
123738846 5271 Pentapetalae View MSA
122788362 5272 Eudicot View MSA
122051079 5273 Angiosperm View MSA
121346091 5274 Embryophyte View MSA
123380325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104     Low Low
cufflinks 0.264     Low High
cufflinks 0.095     Low Low
cufflinks 0.195     Low  
cufflinks 0.151     Low  
cufflinks 0.22     Low  

0 Strain