Gene : RHF1A A. thaliana TAIR10
Primary Identifier:  ? AT4G14220 Defline:  (1 of 1) PTHR22763//PTHR22763:SF65 - RING ZINC FINGER PROTEIN // E3 UBIQUITIN-PROTEIN LIGASE RHF1A
Genomic Order:  1274 Name:  ? AT4G14220
Secondary Identifier:  ? PAC:19646581
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G14220 0.5kb upstream 0.5kb upstream 3182 true Chr4: 8195381-8198562 Arabidopsis thaliana
AT4G14220 0.5kb upstream 0.5kb upstream 500 false Chr4: 8195381-8195880 Arabidopsis thaliana
AT4G14220 0.5kb downstream 0.5kb downstream 3182 true Chr4: 8195881-8199062 Arabidopsis thaliana
AT4G14220 0.5kb downstream 0.5kb downstream 500 false Chr4: 8198563-8199062 Arabidopsis thaliana
AT4G14220 1.0kb upstream 1.0kb upstream 3682 true Chr4: 8194881-8198562 Arabidopsis thaliana
AT4G14220 1.0kb upstream 1.0kb upstream 1000 false Chr4: 8194881-8195880 Arabidopsis thaliana
AT4G14220 1.0kb downstream 1.0kb downstream 3682 true Chr4: 8195881-8199562 Arabidopsis thaliana
AT4G14220 1.0kb downstream 1.0kb downstream 1000 false Chr4: 8198563-8199562 Arabidopsis thaliana
AT4G14220 2.0kb upstream 2.0kb upstream 4682 true Chr4: 8193881-8198562 Arabidopsis thaliana
AT4G14220 2.0kb upstream 2.0kb upstream 2000 false Chr4: 8193881-8195880 Arabidopsis thaliana
AT4G14220 2.0kb downstream 2.0kb downstream 4682 true Chr4: 8195881-8200562 Arabidopsis thaliana
AT4G14220 2.0kb downstream 2.0kb downstream 2000 false Chr4: 8198563-8200562 Arabidopsis thaliana
AT4G14220 5.0kb upstream 5.0kb upstream 7682 true Chr4: 8190881-8198562 Arabidopsis thaliana
AT4G14220 5.0kb upstream 5.0kb upstream 5000 false Chr4: 8190881-8195880 Arabidopsis thaliana
AT4G14220 5.0kb downstream 5.0kb downstream 7682 true Chr4: 8195881-8203562 Arabidopsis thaliana
AT4G14220 5.0kb downstream 5.0kb downstream 5000 false Chr4: 8198563-8203562 Arabidopsis thaliana
AT4G14220 10.0kb upstream 10.0kb upstream 12682 true Chr4: 8185881-8198562 Arabidopsis thaliana
AT4G14220 10.0kb upstream 10.0kb upstream 10000 false Chr4: 8185881-8195880 Arabidopsis thaliana
AT4G14220 10.0kb downstream 10.0kb downstream 12682 true Chr4: 8195881-8208562 Arabidopsis thaliana
AT4G14220 10.0kb downstream 10.0kb downstream 10000 false Chr4: 8198563-8208562 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791776 5273 Angiosperm View MSA
122360344 5261 Brassicaceae View MSA
123827738 5264 Brassicales-Malvales View MSA
124345942 5266 SBM View MSA
124237731 5268 Malvidae View MSA
124067987 5270 Rosid View MSA
123741405 5271 Pentapetalae View MSA
122791979 5272 Eudicot View MSA
121350334 5274 Embryophyte View MSA
123381683 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.993       High
cufflinks 7.095        
cufflinks 7.93        
cufflinks 9.126        
cufflinks 8.176        
cufflinks 6.731        

0 Strain