Gene : EMB2770 A. thaliana TAIR10
Primary Identifier:  ? AT4G03430 Defline:  (1 of 1) K12855 - pre-mRNA-processing factor 6 (PRPF6, PRP6)
Genomic Order:  398 Name:  ? AT4G03430
Secondary Identifier:  ? PAC:19646727
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G03430 0.5kb upstream 0.5kb upstream 3930 true Chr4: 1517134-1521063 Arabidopsis thaliana
AT4G03430 0.5kb upstream 0.5kb upstream 500 false Chr4: 1520564-1521063 Arabidopsis thaliana
AT4G03430 0.5kb downstream 0.5kb downstream 3930 true Chr4: 1516634-1520563 Arabidopsis thaliana
AT4G03430 0.5kb downstream 0.5kb downstream 500 false Chr4: 1516634-1517133 Arabidopsis thaliana
AT4G03430 1.0kb upstream 1.0kb upstream 4430 true Chr4: 1517134-1521563 Arabidopsis thaliana
AT4G03430 1.0kb upstream 1.0kb upstream 1000 false Chr4: 1520564-1521563 Arabidopsis thaliana
AT4G03430 1.0kb downstream 1.0kb downstream 4430 true Chr4: 1516134-1520563 Arabidopsis thaliana
AT4G03430 1.0kb downstream 1.0kb downstream 1000 false Chr4: 1516134-1517133 Arabidopsis thaliana
AT4G03430 2.0kb upstream 2.0kb upstream 5430 true Chr4: 1517134-1522563 Arabidopsis thaliana
AT4G03430 2.0kb upstream 2.0kb upstream 2000 false Chr4: 1520564-1522563 Arabidopsis thaliana
AT4G03430 2.0kb downstream 2.0kb downstream 5430 true Chr4: 1515134-1520563 Arabidopsis thaliana
AT4G03430 2.0kb downstream 2.0kb downstream 2000 false Chr4: 1515134-1517133 Arabidopsis thaliana
AT4G03430 5.0kb upstream 5.0kb upstream 8430 true Chr4: 1517134-1525563 Arabidopsis thaliana
AT4G03430 5.0kb upstream 5.0kb upstream 5000 false Chr4: 1520564-1525563 Arabidopsis thaliana
AT4G03430 5.0kb downstream 5.0kb downstream 8430 true Chr4: 1512134-1520563 Arabidopsis thaliana
AT4G03430 5.0kb downstream 5.0kb downstream 5000 false Chr4: 1512134-1517133 Arabidopsis thaliana
AT4G03430 10.0kb upstream 10.0kb upstream 13430 true Chr4: 1517134-1530563 Arabidopsis thaliana
AT4G03430 10.0kb upstream 10.0kb upstream 10000 false Chr4: 1520564-1530563 Arabidopsis thaliana
AT4G03430 10.0kb downstream 10.0kb downstream 13430 true Chr4: 1507134-1520563 Arabidopsis thaliana
AT4G03430 10.0kb downstream 10.0kb downstream 10000 false Chr4: 1507134-1517133 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374110 5261 Brassicaceae View MSA
123830939 5264 Brassicales-Malvales View MSA
124341097 5266 SBM View MSA
124239060 5268 Malvidae View MSA
124061067 5270 Rosid View MSA
123741007 5271 Pentapetalae View MSA
122792315 5272 Eudicot View MSA
122043697 5273 Angiosperm View MSA
121346890 5274 Embryophyte View MSA
123424370 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.133        
cufflinks 23.165        
cufflinks 17.809       Low
cufflinks 27.144       High
cufflinks 20.764        
cufflinks 27.111       High

0 Strain