Gene : FRI A. thaliana TAIR10
Primary Identifier:  ? AT4G00650 Defline:  (1 of 8) PF07899 - Frigida-like protein (Frigida)
Genomic Order:  77 Name:  ? AT4G00650
Secondary Identifier:  ? PAC:19647783
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G00650 0.5kb upstream 0.5kb upstream 2978 true Chr4: 268526-271503 Arabidopsis thaliana
AT4G00650 0.5kb upstream 0.5kb upstream 500 false Chr4: 268526-269025 Arabidopsis thaliana
AT4G00650 0.5kb downstream 0.5kb downstream 2978 true Chr4: 269026-272003 Arabidopsis thaliana
AT4G00650 0.5kb downstream 0.5kb downstream 500 false Chr4: 271504-272003 Arabidopsis thaliana
AT4G00650 1.0kb upstream 1.0kb upstream 3478 true Chr4: 268026-271503 Arabidopsis thaliana
AT4G00650 1.0kb upstream 1.0kb upstream 1000 false Chr4: 268026-269025 Arabidopsis thaliana
AT4G00650 1.0kb downstream 1.0kb downstream 3478 true Chr4: 269026-272503 Arabidopsis thaliana
AT4G00650 1.0kb downstream 1.0kb downstream 1000 false Chr4: 271504-272503 Arabidopsis thaliana
AT4G00650 2.0kb upstream 2.0kb upstream 4478 true Chr4: 267026-271503 Arabidopsis thaliana
AT4G00650 2.0kb upstream 2.0kb upstream 2000 false Chr4: 267026-269025 Arabidopsis thaliana
AT4G00650 2.0kb downstream 2.0kb downstream 4478 true Chr4: 269026-273503 Arabidopsis thaliana
AT4G00650 2.0kb downstream 2.0kb downstream 2000 false Chr4: 271504-273503 Arabidopsis thaliana
AT4G00650 5.0kb upstream 5.0kb upstream 7478 true Chr4: 264026-271503 Arabidopsis thaliana
AT4G00650 5.0kb upstream 5.0kb upstream 5000 false Chr4: 264026-269025 Arabidopsis thaliana
AT4G00650 5.0kb downstream 5.0kb downstream 7478 true Chr4: 269026-276503 Arabidopsis thaliana
AT4G00650 5.0kb downstream 5.0kb downstream 5000 false Chr4: 271504-276503 Arabidopsis thaliana
AT4G00650 10.0kb upstream 10.0kb upstream 12478 true Chr4: 259026-271503 Arabidopsis thaliana
AT4G00650 10.0kb upstream 10.0kb upstream 10000 false Chr4: 259026-269025 Arabidopsis thaliana
AT4G00650 10.0kb downstream 10.0kb downstream 12478 true Chr4: 269026-281503 Arabidopsis thaliana
AT4G00650 10.0kb downstream 10.0kb downstream 10000 false Chr4: 271504-281503 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330723 5261 Brassicaceae Singleton cluster - no MSA
123771949 5264 Brassicales-Malvales Singleton cluster - no MSA
124346964 5266 SBM View MSA
124180929 5268 Malvidae View MSA
124074741 5270 Rosid View MSA
123752761 5271 Pentapetalae View MSA
122774770 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.428        
cufflinks 4.959        
cufflinks 2.947        
cufflinks 5.129       High
cufflinks 2.696       Low
cufflinks 4.715        

0 Strain