Gene : ARFA1E A. thaliana TAIR10
Primary Identifier:  ? AT3G62290 Defline:  (1 of 6) K07937 - ADP-ribosylation factor 1 (ARF1)
Genomic Order:  5307 Name:  ? AT3G62290
Secondary Identifier:  ? PAC:19663743
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G62290 0.5kb upstream 0.5kb upstream 2774 true Chr3: 23051044-23053817 Arabidopsis thaliana
AT3G62290 0.5kb upstream 0.5kb upstream 500 false Chr3: 23051044-23051543 Arabidopsis thaliana
AT3G62290 0.5kb downstream 0.5kb downstream 2774 true Chr3: 23051544-23054317 Arabidopsis thaliana
AT3G62290 0.5kb downstream 0.5kb downstream 500 false Chr3: 23053818-23054317 Arabidopsis thaliana
AT3G62290 1.0kb upstream 1.0kb upstream 3274 true Chr3: 23050544-23053817 Arabidopsis thaliana
AT3G62290 1.0kb upstream 1.0kb upstream 1000 false Chr3: 23050544-23051543 Arabidopsis thaliana
AT3G62290 1.0kb downstream 1.0kb downstream 3274 true Chr3: 23051544-23054817 Arabidopsis thaliana
AT3G62290 1.0kb downstream 1.0kb downstream 1000 false Chr3: 23053818-23054817 Arabidopsis thaliana
AT3G62290 2.0kb upstream 2.0kb upstream 4274 true Chr3: 23049544-23053817 Arabidopsis thaliana
AT3G62290 2.0kb upstream 2.0kb upstream 2000 false Chr3: 23049544-23051543 Arabidopsis thaliana
AT3G62290 2.0kb downstream 2.0kb downstream 4274 true Chr3: 23051544-23055817 Arabidopsis thaliana
AT3G62290 2.0kb downstream 2.0kb downstream 2000 false Chr3: 23053818-23055817 Arabidopsis thaliana
AT3G62290 5.0kb upstream 5.0kb upstream 7274 true Chr3: 23046544-23053817 Arabidopsis thaliana
AT3G62290 5.0kb upstream 5.0kb upstream 5000 false Chr3: 23046544-23051543 Arabidopsis thaliana
AT3G62290 5.0kb downstream 5.0kb downstream 7274 true Chr3: 23051544-23058817 Arabidopsis thaliana
AT3G62290 5.0kb downstream 5.0kb downstream 5000 false Chr3: 23053818-23058817 Arabidopsis thaliana
AT3G62290 10.0kb upstream 10.0kb upstream 12274 true Chr3: 23041544-23053817 Arabidopsis thaliana
AT3G62290 10.0kb upstream 10.0kb upstream 10000 false Chr3: 23041544-23051543 Arabidopsis thaliana
AT3G62290 10.0kb downstream 10.0kb downstream 12274 true Chr3: 23051544-23063817 Arabidopsis thaliana
AT3G62290 10.0kb downstream 10.0kb downstream 10000 false Chr3: 23053818-23063817 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379959 5261 Brassicaceae View MSA
123839591 5264 Brassicales-Malvales View MSA
124351572 5266 SBM View MSA
124253739 5268 Malvidae View MSA
124074730 5270 Rosid View MSA
123752155 5271 Pentapetalae View MSA
122796047 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.185     High  
cufflinks 130.398     High High
cufflinks 58.082     High  
cufflinks 129.877     High High
cufflinks 57.978     High  
cufflinks 114.582     High  

0 Strain