Gene : CRF6 A. thaliana TAIR10
Primary Identifier:  ? AT3G61630 Defline:  (1 of 1) PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR // SUBFAMILY NOT NAMED
Genomic Order:  5231 Name:  ? AT3G61630
Secondary Identifier:  ? PAC:19659359
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G61630 0.5kb upstream 0.5kb upstream 1848 true Chr3: 22804680-22806527 Arabidopsis thaliana
AT3G61630 0.5kb upstream 0.5kb upstream 500 false Chr3: 22804680-22805179 Arabidopsis thaliana
AT3G61630 0.5kb downstream 0.5kb downstream 1848 true Chr3: 22805180-22807027 Arabidopsis thaliana
AT3G61630 0.5kb downstream 0.5kb downstream 500 false Chr3: 22806528-22807027 Arabidopsis thaliana
AT3G61630 1.0kb upstream 1.0kb upstream 2348 true Chr3: 22804180-22806527 Arabidopsis thaliana
AT3G61630 1.0kb upstream 1.0kb upstream 1000 false Chr3: 22804180-22805179 Arabidopsis thaliana
AT3G61630 1.0kb downstream 1.0kb downstream 2348 true Chr3: 22805180-22807527 Arabidopsis thaliana
AT3G61630 1.0kb downstream 1.0kb downstream 1000 false Chr3: 22806528-22807527 Arabidopsis thaliana
AT3G61630 2.0kb upstream 2.0kb upstream 3348 true Chr3: 22803180-22806527 Arabidopsis thaliana
AT3G61630 2.0kb upstream 2.0kb upstream 2000 false Chr3: 22803180-22805179 Arabidopsis thaliana
AT3G61630 2.0kb downstream 2.0kb downstream 3348 true Chr3: 22805180-22808527 Arabidopsis thaliana
AT3G61630 2.0kb downstream 2.0kb downstream 2000 false Chr3: 22806528-22808527 Arabidopsis thaliana
AT3G61630 5.0kb upstream 5.0kb upstream 6348 true Chr3: 22800180-22806527 Arabidopsis thaliana
AT3G61630 5.0kb upstream 5.0kb upstream 5000 false Chr3: 22800180-22805179 Arabidopsis thaliana
AT3G61630 5.0kb downstream 5.0kb downstream 6348 true Chr3: 22805180-22811527 Arabidopsis thaliana
AT3G61630 5.0kb downstream 5.0kb downstream 5000 false Chr3: 22806528-22811527 Arabidopsis thaliana
AT3G61630 10.0kb upstream 10.0kb upstream 11348 true Chr3: 22795180-22806527 Arabidopsis thaliana
AT3G61630 10.0kb upstream 10.0kb upstream 10000 false Chr3: 22795180-22805179 Arabidopsis thaliana
AT3G61630 10.0kb downstream 10.0kb downstream 11348 true Chr3: 22805180-22816527 Arabidopsis thaliana
AT3G61630 10.0kb downstream 10.0kb downstream 10000 false Chr3: 22806528-22816527 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370749 5261 Brassicaceae View MSA
123838467 5264 Brassicales-Malvales View MSA
124350812 5266 SBM View MSA
124241460 5268 Malvidae View MSA
124072043 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.285       Low
cufflinks 15.356        
cufflinks 13.798        
cufflinks 13.282        
cufflinks 16.001        
cufflinks 9.837        

0 Strain