Gene : Seita.7G056400 S. italica v2.2
Genomic Order:  564 Name:  ? Seita.7G056400
Secondary Identifier:  ? PAC:32704467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.7G056400 0.5kb upstream 0.5kb upstream 7272 true scaffold_7: 15542084-15549355 Setaria italica
Seita.7G056400 0.5kb upstream 0.5kb upstream 500 false scaffold_7: 15542084-15542583 Setaria italica
Seita.7G056400 0.5kb downstream 0.5kb downstream 7272 true scaffold_7: 15542584-15549855 Setaria italica
Seita.7G056400 0.5kb downstream 0.5kb downstream 500 false scaffold_7: 15549356-15549855 Setaria italica
Seita.7G056400 1.0kb upstream 1.0kb upstream 7772 true scaffold_7: 15541584-15549355 Setaria italica
Seita.7G056400 1.0kb upstream 1.0kb upstream 1000 false scaffold_7: 15541584-15542583 Setaria italica
Seita.7G056400 1.0kb downstream 1.0kb downstream 7772 true scaffold_7: 15542584-15550355 Setaria italica
Seita.7G056400 1.0kb downstream 1.0kb downstream 1000 false scaffold_7: 15549356-15550355 Setaria italica
Seita.7G056400 2.0kb upstream 2.0kb upstream 8772 true scaffold_7: 15540584-15549355 Setaria italica
Seita.7G056400 2.0kb upstream 2.0kb upstream 2000 false scaffold_7: 15540584-15542583 Setaria italica
Seita.7G056400 2.0kb downstream 2.0kb downstream 8772 true scaffold_7: 15542584-15551355 Setaria italica
Seita.7G056400 2.0kb downstream 2.0kb downstream 2000 false scaffold_7: 15549356-15551355 Setaria italica
Seita.7G056400 5.0kb upstream 5.0kb upstream 11772 true scaffold_7: 15537584-15549355 Setaria italica
Seita.7G056400 5.0kb upstream 5.0kb upstream 5000 false scaffold_7: 15537584-15542583 Setaria italica
Seita.7G056400 5.0kb downstream 5.0kb downstream 11772 true scaffold_7: 15542584-15554355 Setaria italica
Seita.7G056400 5.0kb downstream 5.0kb downstream 5000 false scaffold_7: 15549356-15554355 Setaria italica
Seita.7G056400 10.0kb upstream 10.0kb upstream 16772 true scaffold_7: 15532584-15549355 Setaria italica
Seita.7G056400 10.0kb upstream 10.0kb upstream 10000 false scaffold_7: 15532584-15542583 Setaria italica
Seita.7G056400 10.0kb downstream 10.0kb downstream 16772 true scaffold_7: 15542584-15559355 Setaria italica
Seita.7G056400 10.0kb downstream 10.0kb downstream 10000 false scaffold_7: 15549356-15559355 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122187999 5267 Panicoideae View MSA
124581198 5269 Grass View MSA
122051079 5273 Angiosperm View MSA
121346091 5274 Embryophyte View MSA
123380325 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.899        
cufflinks 4.758       High
cufflinks 3.712       High
cufflinks 1.696        
cufflinks 1.318       Low
cufflinks 5.73       High
cufflinks 2.062        
cufflinks 3.155        
cufflinks 2.289        
cufflinks 1.324       Low
cufflinks 2.672        
cufflinks 1.777        
cufflinks 1.191       Low
cufflinks 3.258        
cufflinks 2.491        
cufflinks 2.301        
cufflinks 2.476        
cufflinks 1.299       Low
cufflinks 1.593        
cufflinks 2.517        

0 Strain