Gene : Seita.3G081300 S. italica v2.2
Defline:  (1 of 1) PTHR10992:SF743 - ALPHA/BETA-HYDROLASE DOMAIN-CONTAINING PROTEIN Genomic Order:  813
Name:  ? Seita.3G081300 Secondary Identifier:  ? PAC:32711866
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G081300 0.5kb upstream 0.5kb upstream 2966 true scaffold_3: 5197591-5200556 Setaria italica
Seita.3G081300 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 5197591-5198090 Setaria italica
Seita.3G081300 0.5kb downstream 0.5kb downstream 2966 true scaffold_3: 5198091-5201056 Setaria italica
Seita.3G081300 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 5200557-5201056 Setaria italica
Seita.3G081300 1.0kb upstream 1.0kb upstream 3466 true scaffold_3: 5197091-5200556 Setaria italica
Seita.3G081300 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 5197091-5198090 Setaria italica
Seita.3G081300 1.0kb downstream 1.0kb downstream 3466 true scaffold_3: 5198091-5201556 Setaria italica
Seita.3G081300 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 5200557-5201556 Setaria italica
Seita.3G081300 2.0kb upstream 2.0kb upstream 4466 true scaffold_3: 5196091-5200556 Setaria italica
Seita.3G081300 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 5196091-5198090 Setaria italica
Seita.3G081300 2.0kb downstream 2.0kb downstream 4466 true scaffold_3: 5198091-5202556 Setaria italica
Seita.3G081300 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 5200557-5202556 Setaria italica
Seita.3G081300 5.0kb upstream 5.0kb upstream 7466 true scaffold_3: 5193091-5200556 Setaria italica
Seita.3G081300 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 5193091-5198090 Setaria italica
Seita.3G081300 5.0kb downstream 5.0kb downstream 7466 true scaffold_3: 5198091-5205556 Setaria italica
Seita.3G081300 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 5200557-5205556 Setaria italica
Seita.3G081300 10.0kb upstream 10.0kb upstream 12466 true scaffold_3: 5188091-5200556 Setaria italica
Seita.3G081300 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 5188091-5198090 Setaria italica
Seita.3G081300 10.0kb downstream 10.0kb downstream 12466 true scaffold_3: 5198091-5210556 Setaria italica
Seita.3G081300 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 5200557-5210556 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177857 5267 Panicoideae View MSA
124571417 5269 Grass View MSA
122043724 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121344597 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.484        
cufflinks 9.222        
cufflinks 15.273     High  
cufflinks 9.016        
cufflinks 14.176     High  
cufflinks 8.955        
cufflinks 21.164     High High
cufflinks 17.117     High  
cufflinks 15.154     High  
cufflinks 2.489        
cufflinks 2.857        
cufflinks 0.467       Low
cufflinks 0.406       Low
cufflinks 21.069     High High
cufflinks 0.854       Low
cufflinks 25.239     High High
cufflinks 0.682       Low
cufflinks 5.545        
cufflinks 11.761     High  
cufflinks 0.831       Low

0 Strain