Protein Domain : IPR007196

Type:  Domain Name:  CCR4-Not complex component, Not1, C-terminal
Description:  The Ccr4-Not complex is a global regulator of gene expression that is conserved from yeast to human. It affects genes positively and negatively and is thought to regulate transcription factor IID function. In Saccharomyces cerevisiae, it exists in two prominent forms and consists of at least nine core subunits: the five Not proteins (Not1p to Not5p), Caf1p, Caf40p, Caf130p and Ccr4p []. The Ccr4-Not complex regulates many different cellular functions, including RNA degradation and transcription initiation. It may be a regulatory platform that senses nutrient levels and stress []. Caf1p and Ccr4p, are directly involved in mRNA deadenylation, and Caf1p is associated with Dhh1p, a putative RNA helicase thought to be a component of the decapping complex []. Pop2, a component of the Ccr4-Not complex, functions as a deadenylase [].The Ccr4-Not complex is a global regulator of transcription that affects genes positively and negatively and is thought to regulate transcription factor TFIID []. Short Name:  CCR4-Not_Not1_C

0 Child Features

0 Contains

1 Cross References

Identifier
PF04054

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

3256 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
440060 D8R9T6 PAC:15401945 Selaginella moellendorffii 1838  
evm.model.supercontig_587.1 PAC:16423095 Carica papaya 732  
30174.m008811 B9RD55 PAC:16822456 Ricinus communis 2330  
Cucsa.259830.1 PAC:16973080 Cucumis sativus 2390  
Cucsa.259830.2 PAC:16973081 Cucumis sativus 2280  
orange1.1g000444m A0A067H470 PAC:18137737 Citrus sinensis 1498  
orange1.1g000072m PAC:18137726 Citrus sinensis 2425  
orange1.1g000073m PAC:18137727 Citrus sinensis 2421  
orange1.1g000075m PAC:18137728 Citrus sinensis 2419  
orange1.1g000077m PAC:18137730 Citrus sinensis 2408  
orange1.1g000076m PAC:18137729 Citrus sinensis 2415  
orange1.1g000078m PAC:18137731 Citrus sinensis 2405  
orange1.1g000081m PAC:18137732 Citrus sinensis 2362  
orange1.1g000087m PAC:18137733 Citrus sinensis 2284  
AT1G02080.1 F4HVV6 PAC:19649687 Arabidopsis thaliana 2431  
AT1G02080.2 F4HVV7 PAC:19649688 Arabidopsis thaliana 2377  
Thhalv10006521m V4KZN5 PAC:20187660 Eutrema salsugineum 2391  
Thhalv10006522m V4KGC8 PAC:20187661 Eutrema salsugineum 2390  
Ciclev10018431m V4VYM8 PAC:20807941 Citrus clementina 2423  
Ciclev10018430m V4U3B9 PAC:20807940 Citrus clementina 2425  
Ciclev10018433m V4U8P7 PAC:20807943 Citrus clementina 2362  
Ciclev10018432m V4TE04 PAC:20807942 Citrus clementina 2421  
Lus10028176 PAC:23166532 Linum usitatissimum 2463  
Lus10024660 PAC:23161668 Linum usitatissimum 2327  
Lus10042876 PAC:23181887 Linum usitatissimum 1171  
Potri.001G125300.1 A0A2K2BWM5 PAC:27044310 Populus trichocarpa 219  
Potri.002G143000.3 PAC:27022462 Populus trichocarpa 2370  
Potri.002G143000.4 A0A2K2BIR0 PAC:27022461 Populus trichocarpa 2392  
Potri.002G143000.2 PAC:27022463 Populus trichocarpa 2241  
Potri.002G143000.5 A0A2K2BIR9 PAC:27022460 Populus trichocarpa 2398  

4 Publications

First Author Title Year Journal Volume Pages PubMed ID
            11696541
            10637334
            12957374
            18430587